RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 LARP1BQ659C4 914 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 DPP8Q6V1X1 898 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 DEFB132Q7Z7B7 95 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 CERS3Q8IU89 383 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 NSUN7Q8NE18 718 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 NKX2-3Q8TAU0 364 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 CNKSR1Q969H4 720 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 EYA3Q99504 573 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 NOL10Q9BSC4 688 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 ZC3H12CQ9C0D7 883 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 LMBRD1Q9NUN5 540 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 AATFQ9NY61 560 aaKnown RBP eCLIP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 BRPF3Q9ULD4 1205 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 ANGEL1Q9UNK9 670 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 ATP6V1DQ9Y5K8 247 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 GREB1LQ9C091 1923 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 DICER1Q9UPY3 1922 aaKnown RBP7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 MROH7-TTC4A0A0A0MT08 1334 aa7.22□□□□□ -1.25
TRAPPC1-204ENST00000571947 SNED1Q8TER0 1413 aa7.21□□□□□ -1.25
TRAPPC1-204ENST00000571947 VPS37CA5D8V6 355 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 RIMBP2O15034 1052 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 DHX16O60231 1041 aaKnown RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 JAK2O60674 1132 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 DTNBO60941 627 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 KDM4AO75164 1064 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 BAG3O95817 575 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 LIFRP42702 1097 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 TMEM67Q5HYA8 995 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 CTR9Q6PD62 1173 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 SGMS1Q86VZ5 419 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 CCDC125Q86Z20 511 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 SLF2Q8IX21 1173 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 IGDCC4Q8TDY8 1250 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 FAM163AQ96GL9 167 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 LY9Q9HBG7 655 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 INCENPQ9NQS7 918 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 ZSWIM5Q9P217 1185 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 ARPP21Q9UBL0 812 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 NAP1L2Q9ULW6 460 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 HPS5Q9UPZ3 1129 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 KIF3AQ9Y496 699 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 GAKO14976 1311 aa7.21□□□□□ -1.26
TRAPPC1-204ENST00000571947 NID2Q14112 1375 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 GPR75-ASB3A0A0A6YYF3 556 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 PTPDC1A2A3K4 754 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 GOLGA8BA8MQT2 603 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 USP17L12C9JPN9 530 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 USP17L21D6R901 530 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 IFIT3O14879 490 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 ORC4O43929 436 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 PRPF40AO75400 957 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 CHRNA5P30532 468 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 USP5P45974 858 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 NT5C2P49902 561 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 GTF2IP78347 998 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 SART3Q15020 963 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 DIXDC1Q155Q3 683 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 KLHL40Q2TBA0 621 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 RRP12Q5JTH9 1297 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 MFSD14BQ5SR56 506 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 APOA5Q6Q788 366 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 OLFM4Q6UX06 510 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 FAM184AQ8NB25 1140 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 TMEM87AQ8NBN3 555 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 SH3RF3Q8TEJ3 882 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 C7orf43Q8WVR3 580 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 ESR2Q92731 530 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 RTFDC1Q9BY42 306 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 NCOA5Q9HCD5 579 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
TRAPPC1-204ENST00000571947 CYP2D7A0A087X1C5 515 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 ERICH2A1L162 156 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 CCDC69A6NI79 296 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 G3V3G9 751 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 ZBTB43O43298 467 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 SLC3A2P08195 630 aaKnown RBP7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 PLCG2P16885 1265 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 DEKP35659 375 aaKnown RBP7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 BTDP43251 543 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 METAP2P50579 478 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 RCAN1P53805 252 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 FKBP1AP62942 108 aaKnown RBP7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 WTAPQ15007 396 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 SEC23AQ15436 765 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 DCAF8Q5TAQ9 597 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 C12orf60Q5U649 245 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 NFXL1Q6ZNB6 911 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 CDC37L1Q7L3B6 337 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 RGS22Q8NE09 1264 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 DDX11Q96FC9 970 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 CHAMP1Q96JM3 812 aa7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 PDGFDQ9GZP0 370 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC1-204ENST00000571947 SENP2Q9HC62 589 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms