RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 BRI3BPQ8WY22 251 aa37.2■■■■□ 3.55
CTDNEP1-206ENST00000571409 ZNF512BQ96KM6 892 aaPredicted RBP37.2■■■■□ 3.55
CTDNEP1-206ENST00000571409 ZSCAN29Q8IWY8 852 aaPredicted RBP37.19■■■■□ 3.54
CTDNEP1-206ENST00000571409 ZBTB40Q9NUA8 1239 aa37.19■■■■□ 3.54
CTDNEP1-206ENST00000571409 MAST2Q6P0Q8 1798 aa37.19■■■■□ 3.54
CTDNEP1-206ENST00000571409 CRHR2Q13324 411 aa37.18■■■■□ 3.54
CTDNEP1-206ENST00000571409 SH3BP5LQ7L8J4 393 aa37.18■■■■□ 3.54
CTDNEP1-206ENST00000571409 ATRNL1Q5VV63 1379 aa37.17■■■■□ 3.54
CTDNEP1-206ENST00000571409 CYP2E1P05181 493 aaPredicted RBP37.17■■■■□ 3.54
CTDNEP1-206ENST00000571409 PPIL2Q13356 520 aa37.17■■■■□ 3.54
CTDNEP1-206ENST00000571409 RPAP2Q8IXW5 612 aaPredicted RBP37.17■■■■□ 3.54
CTDNEP1-206ENST00000571409 IRF6O14896 467 aa37.16■■■■□ 3.54
CTDNEP1-206ENST00000571409 ZAP70P43403 619 aa37.16■■■■□ 3.54
CTDNEP1-206ENST00000571409 HSP90AB4PQ58FF6 505 aa37.16■■■■□ 3.54
CTDNEP1-206ENST00000571409 DDTLA6NHG4 134 aaPredicted RBP37.15■■■■□ 3.54
CTDNEP1-206ENST00000571409 PPATQ06203 517 aa37.15■■■■□ 3.54
CTDNEP1-206ENST00000571409 CHMP4BQ9H444 224 aaKnown RBP37.15■■■■□ 3.54
CTDNEP1-206ENST00000571409 MAP4K4O95819 1239 aaPredicted RBP37.14■■■■□ 3.54
CTDNEP1-206ENST00000571409 CETPP11597 493 aa37.14■■■■□ 3.54
CTDNEP1-206ENST00000571409 SNAPC2Q13487 334 aa37.14■■■■□ 3.54
CTDNEP1-206ENST00000571409 PKN2Q16513 984 aaKnown RBP37.14■■■■□ 3.54
CTDNEP1-206ENST00000571409 NAA16Q6N069 864 aaPredicted RBP37.14■■■■□ 3.54
CTDNEP1-206ENST00000571409 HMMRO75330 724 aa37.13■■■■□ 3.53
CTDNEP1-206ENST00000571409 NOL9Q5SY16 702 aaKnown RBP37.13■■■■□ 3.53
CTDNEP1-206ENST00000571409 C20orf194Q5TEA3 1177 aa37.13■■■■□ 3.53
CTDNEP1-206ENST00000571409 AACSQ86V21 672 aa37.13■■■■□ 3.53
CTDNEP1-206ENST00000571409 MYO5AQ9Y4I1 1855 aaKnown RBP37.13■■■■□ 3.53
CTDNEP1-206ENST00000571409 SIRT2Q8IXJ6 389 aa37.12■■■■□ 3.53
CTDNEP1-206ENST00000571409 FAM43AQ8N2R8 423 aa37.12■■■■□ 3.53
CTDNEP1-206ENST00000571409 GOLGA6L2Q8N9W4 650 aaPredicted RBP37.12■■■■□ 3.53
CTDNEP1-206ENST00000571409 RHPN1Q8TCX5 695 aa37.12■■■■□ 3.53
CTDNEP1-206ENST00000571409 NOL10Q9BSC4 688 aaKnown RBP37.12■■■■□ 3.53
CTDNEP1-206ENST00000571409 NPM3O75607 178 aaKnown RBP37.11■■■■□ 3.53
CTDNEP1-206ENST00000571409 PDE3AQ14432 1141 aa37.11■■■■□ 3.53
CTDNEP1-206ENST00000571409 TAF1CQ15572 869 aaPredicted RBP37.11■■■■□ 3.53
CTDNEP1-206ENST00000571409 IL1RAPL2Q9NP60 686 aa37.11■■■■□ 3.53
CTDNEP1-206ENST00000571409 PIH1D3Q9NQM4 214 aaKnown RBP37.1■■■■□ 3.53
CTDNEP1-206ENST00000571409 PHF20L1A8MW92 1017 aa37.09■■■■□ 3.53
CTDNEP1-206ENST00000571409 MAP3K10Q02779 954 aa37.09■■■■□ 3.53
CTDNEP1-206ENST00000571409 TEX11Q8IYF3 940 aa37.09■■■■□ 3.53
CTDNEP1-206ENST00000571409 APBB1O00213 710 aa37.08■■■■□ 3.53
CTDNEP1-206ENST00000571409 SLURP2P0DP57 97 aa37.08■■■■□ 3.53
CTDNEP1-206ENST00000571409 ZFYVE28Q9HCC9 887 aa37.08■■■■□ 3.53
CTDNEP1-206ENST00000571409 AATFQ9NY61 560 aaKnown RBP eCLIP37.08■■■■□ 3.53
CTDNEP1-206ENST00000571409 HPS5Q9UPZ3 1129 aa37.08■■■■□ 3.53
CTDNEP1-206ENST00000571409 BTBD19C9JJ37 291 aa37.07■■■■□ 3.52
CTDNEP1-206ENST00000571409 BAG3O95817 575 aa37.07■■■■□ 3.52
CTDNEP1-206ENST00000571409 SH3RF3Q8TEJ3 882 aaPredicted RBP37.07■■■■□ 3.52
CTDNEP1-206ENST00000571409 KIF1BPQ96EK5 621 aa37.07■■■■□ 3.52
CTDNEP1-206ENST00000571409 OSBPL5Q9H0X9 879 aaPredicted RBP37.07■■■■□ 3.52
CTDNEP1-206ENST00000571409 IGSF3O75054 1194 aa37.06■■■■□ 3.52
CTDNEP1-206ENST00000571409 ADGRA1Q86SQ6 560 aa37.06■■■■□ 3.52
CTDNEP1-206ENST00000571409 ERO1AQ96HE7 468 aa37.06■■■■□ 3.52
CTDNEP1-206ENST00000571409 NDUFB9Q9Y6M9 179 aa37.06■■■■□ 3.52
CTDNEP1-206ENST00000571409 COL2A1P02458 1487 aaPredicted RBP37.06■■■■□ 3.52
CTDNEP1-206ENST00000571409 FBXO46Q6PJ61 603 aaPredicted RBP37.05■■■■□ 3.52
CTDNEP1-206ENST00000571409 SCYL3Q8IZE3 742 aa37.05■■■■□ 3.52
CTDNEP1-206ENST00000571409 CD99L2Q8TCZ2 262 aa37.05■■■■□ 3.52
CTDNEP1-206ENST00000571409 KCNH4Q9UQ05 1017 aa37.05■■■■□ 3.52
CTDNEP1-206ENST00000571409 PLCG2P16885 1265 aa37.04■■■■□ 3.52
CTDNEP1-206ENST00000571409 SP3Q02447 781 aa37.04■■■■□ 3.52
CTDNEP1-206ENST00000571409 CLASRPQ8N2M8 674 aaKnown RBP37.04■■■■□ 3.52
CTDNEP1-206ENST00000571409 ZCCHC17Q9NP64 241 aaKnown RBP37.04■■■■□ 3.52
CTDNEP1-206ENST00000571409 TRIM17Q9Y577 477 aa37.04■■■■□ 3.52
CTDNEP1-206ENST00000571409 DOCK1Q14185 1865 aa37.03■■■■□ 3.52
CTDNEP1-206ENST00000571409 IDH1O75874 414 aaKnown RBP37.03■■■■□ 3.52
CTDNEP1-206ENST00000571409 PICK1Q9NRD5 415 aa37.03■■■■□ 3.52
CTDNEP1-206ENST00000571409 PPP4CP60510 307 aa37.02■■■■□ 3.52
CTDNEP1-206ENST00000571409 OTOP1Q7RTM1 612 aa37.02■■■■□ 3.52
CTDNEP1-206ENST00000571409 TBC1D12O60347 775 aa37.01■■■■□ 3.52
CTDNEP1-206ENST00000571409 RAB11FIP3O75154 756 aa37.01■■■■□ 3.52
CTDNEP1-206ENST00000571409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP37.01■■■■□ 3.52
CTDNEP1-206ENST00000571409 CDK5RAP2Q96SN8 1893 aa37.01■■■■□ 3.51
CTDNEP1-206ENST00000571409 FAM196BA6NMK8 535 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 CTNND1O60716 968 aaKnown RBP37■■■■□ 3.51
CTDNEP1-206ENST00000571409 PTPRAP18433 802 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 CYP7A1P22680 504 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 BCL11AQ9H165 835 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 ANTXR1Q9H6X2 564 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 ZHX2Q9Y6X8 837 aa37■■■■□ 3.51
CTDNEP1-206ENST00000571409 RGS19P49795 217 aa36.99■■■■□ 3.51
CTDNEP1-206ENST00000571409 FOCADQ5VW36 1801 aa36.99■■■■□ 3.51
CTDNEP1-206ENST00000571409 CXCL11O14625 94 aa36.98■■■■□ 3.51
CTDNEP1-206ENST00000571409 IFIT2P09913 472 aaKnown RBP36.98■■■■□ 3.51
CTDNEP1-206ENST00000571409 ANKRD23Q86SG2 305 aa36.98■■■■□ 3.51
CTDNEP1-206ENST00000571409 TGFBRAP1Q8WUH2 860 aa36.98■■■■□ 3.51
CTDNEP1-206ENST00000571409 TLR2O60603 784 aa36.97■■■■□ 3.51
CTDNEP1-206ENST00000571409 MAPKAPK5Q8IW41 473 aa36.97■■■■□ 3.51
CTDNEP1-206ENST00000571409 MAGEB6Q8N7X4 407 aa36.97■■■■□ 3.51
CTDNEP1-206ENST00000571409 FLT1P17948 1338 aa36.96■■■■□ 3.51
CTDNEP1-206ENST00000571409 SOX10P56693 466 aa36.96■■■■□ 3.51
CTDNEP1-206ENST00000571409 DYNLL1P63167 89 aaKnown RBP36.96■■■■□ 3.51
CTDNEP1-206ENST00000571409 MOGSQ13724 837 aa36.96■■■■□ 3.51
CTDNEP1-206ENST00000571409 EFCC1Q9HA90 598 aa36.96■■■■□ 3.51
CTDNEP1-206ENST00000571409 MAP3K12Q12852 859 aa36.95■■■■□ 3.51
CTDNEP1-206ENST00000571409 DHX36Q9H2U1 1008 aaKnown RBP36.95■■■■□ 3.51
CTDNEP1-206ENST00000571409 FRMD4AQ9P2Q2 1039 aaPredicted RBP36.95■■■■□ 3.51
CTDNEP1-206ENST00000571409 AFG3L2Q9Y4W6 797 aa36.95■■■■□ 3.51
CTDNEP1-206ENST00000571409 PHIPQ8WWQ0 1821 aa36.94■■■■□ 3.5
CTDNEP1-206ENST00000571409 PDHXO00330 501 aa36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms