RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NFKBIBQ15653 356 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
NUP88-202ENST00000570937 MEI1Q5TIA1 1274 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 SEZ6L2Q6UXD5 910 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 MPRIPQ6WCQ1 1025 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 NOC4LQ9BVI4 516 aaKnown RBP7.01□□□□□ -1.29
NUP88-202ENST00000570937 UNC13AQ9UPW8 1703 aa7.01□□□□□ -1.29
NUP88-202ENST00000570937 SHROOM4Q9ULL8 1493 aa7□□□□□ -1.29
NUP88-202ENST00000570937 NFICP08651 508 aa7□□□□□ -1.29
NUP88-202ENST00000570937 TTBK2Q6IQ55 1244 aa7□□□□□ -1.29
NUP88-202ENST00000570937 GIPC2Q8TF65 315 aa7□□□□□ -1.29
NUP88-202ENST00000570937 MRS2Q9HD23 443 aa7□□□□□ -1.29
NUP88-202ENST00000570937 PRKAG2Q9UGJ0 569 aa7□□□□□ -1.29
NUP88-202ENST00000570937 SCRIBQ14160 1630 aa7□□□□□ -1.29
NUP88-202ENST00000570937 SCO2A0A1W2PP80 73 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 PRR19A6NJB7 356 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 RLBP1P12271 317 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 RAB6AP20340 208 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 RING1Q06587 406 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 TRIM26Q12899 539 aaPredicted RBP6.99□□□□□ -1.29
NUP88-202ENST00000570937 CPSF6Q16630 551 aaKnown RBP eCLIP6.99□□□□□ -1.29
NUP88-202ENST00000570937 AGMOQ6ZNB7 445 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 SHKBP1Q8TBC3 707 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 GATA6Q92908 595 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 GAL3ST3Q96A11 431 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 ACSBG1Q96GR2 724 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 MFSD14AQ96MC6 490 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
NUP88-202ENST00000570937 TTLL4Q14679 1199 aa6.98□□□□□ -1.29
NUP88-202ENST00000570937 RNF214Q8ND24 703 aa6.98□□□□□ -1.29
NUP88-202ENST00000570937 PIDD1Q9HB75 910 aa6.98□□□□□ -1.29
NUP88-202ENST00000570937 C1GALT1Q9NS00 363 aa6.98□□□□□ -1.29
NUP88-202ENST00000570937 VTI1BQ9UEU0 232 aa6.98□□□□□ -1.29
NUP88-202ENST00000570937 F13BP05160 661 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 NEFMP07197 916 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 LIG3P49916 1009 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 LRP8Q14114 963 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 MRPL58Q14197 206 aaKnown RBP6.97□□□□□ -1.29
NUP88-202ENST00000570937 ARTNQ5T4W7 220 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 ZAR1Q86SH2 424 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 SMYD4Q8IYR2 804 aaPredicted RBP6.97□□□□□ -1.29
NUP88-202ENST00000570937 GIMAP7Q8NHV1 300 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 TBC1D32Q96NH3 1257 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 PCDHA4Q9UN74 947 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
NUP88-202ENST00000570937 WDR64B1ANS9 1081 aa6.96□□□□□ -1.3
NUP88-202ENST00000570937 DYNC1LI2O43237 492 aaPredicted RBP6.96□□□□□ -1.3
NUP88-202ENST00000570937 TGFB1P01137 390 aa6.96□□□□□ -1.3
NUP88-202ENST00000570937 ZNF16P17020 682 aaPredicted RBP6.96□□□□□ -1.3
NUP88-202ENST00000570937 NTF4P34130 210 aa6.96□□□□□ -1.3
NUP88-202ENST00000570937 ADMP35318 185 aa6.96□□□□□ -1.3
NUP88-202ENST00000570937 PTPN11Q06124 597 aaPredicted RBP6.96□□□□□ -1.3
NUP88-202ENST00000570937 METTL22Q9BUU2 404 aaPredicted RBP6.96□□□□□ -1.3
NUP88-202ENST00000570937 PCOLCE2Q9UKZ9 415 aa6.96□□□□□ -1.3
NUP88-202ENST00000570937 FANCGO15287 622 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 HCLS1P14317 486 aaPredicted RBP6.95□□□□□ -1.3
NUP88-202ENST00000570937 CD97P48960 835 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 INTS5Q6P9B9 1019 aaKnown RBP6.95□□□□□ -1.3
NUP88-202ENST00000570937 SHISA5Q8N114 240 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 ATG3Q9NT62 314 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 SNCAIPQ9Y6H5 919 aa6.95□□□□□ -1.3
NUP88-202ENST00000570937 RBM47A0AV96 593 aaKnown RBP6.94□□□□□ -1.3
NUP88-202ENST00000570937 KIAA1324LA8MWY0 1029 aaPredicted RBP6.94□□□□□ -1.3
NUP88-202ENST00000570937 DCDC2CA8MYV0 355 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 COBLO75128 1261 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 TFE3P19532 575 aaPredicted RBP6.94□□□□□ -1.3
NUP88-202ENST00000570937 CYP27A1Q02318 531 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 LRFN4Q6PJG9 635 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 CYFIP1Q7L576 1253 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 FBXL6Q8N531 539 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 PHC3Q8NDX5 983 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 ISL2Q96A47 359 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 RSRP1Q9BUV0 290 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 OSBPL1AQ9BXW6 950 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 PIM2Q9P1W9 311 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
NUP88-202ENST00000570937 HYAL3O43820 417 aaPredicted RBP6.93□□□□□ -1.3
NUP88-202ENST00000570937 RNGTTO60942 597 aaKnown RBP6.93□□□□□ -1.3
NUP88-202ENST00000570937 GRIK1P39086 918 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 INPP5AQ14642 412 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 MAP3K11Q16584 847 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 OGFOD3Q6PK18 319 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 HDXQ7Z353 690 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 C12orf40Q86WS4 652 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 ELMO3Q96BJ8 720 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 MIR1-1HGQ9H1L0 117 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 ZFP64Q9NPA5 681 aa6.93□□□□□ -1.3
NUP88-202ENST00000570937 FAM170BA6NMN3 283 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 MED26O95402 600 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 LMNB1P20700 586 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 PWP1Q13610 501 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.92□□□□□ -1.3
NUP88-202ENST00000570937 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
NUP88-202ENST00000570937 PLPPR2Q96GM1 343 aa6.92□□□□□ -1.3
NUP88-202ENST00000570937 TLR6Q9Y2C9 796 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms