RNA–Protein interactions for RNA: ENST00000570692.1

TVP23A-203, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 4

Gene TVP23A, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-203ENST00000570692 SMCR8Q8TEV9 937 aaPredicted RBP19.28■□□□□ 0.68
TVP23A-203ENST00000570692 AFG3L2Q9Y4W6 797 aa19.28■□□□□ 0.68
TVP23A-203ENST00000570692 PTPRAP18433 802 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.27■□□□□ 0.68
TVP23A-203ENST00000570692 SCYL3Q8IZE3 742 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 ANKRD13CQ8N6S4 541 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 ANKLE1Q8NAG6 615 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 COA7Q96BR5 231 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 NBPF3Q9H094 633 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 PICK1Q9NRD5 415 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 SLC45A1Q9Y2W3 748 aa19.27■□□□□ 0.68
TVP23A-203ENST00000570692 LAMA2P24043 3122 aaKnown RBP19.27■□□□□ 0.68
TVP23A-203ENST00000570692 SPTBN5Q9NRC6 3674 aaKnown RBP19.27■□□□□ 0.67
TVP23A-203ENST00000570692 IL16Q14005 1332 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 NBPF7P0C2Y1 421 aaPredicted RBP19.26■□□□□ 0.67
TVP23A-203ENST00000570692 SLURP2P0DP57 97 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 TRIM32Q13049 653 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 UBE2OQ9C0C9 1292 aaKnown RBP19.26■□□□□ 0.67
TVP23A-203ENST00000570692 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
TVP23A-203ENST00000570692 USP40Q9NVE5 1235 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 ATRNL1Q5VV63 1379 aa19.26■□□□□ 0.67
TVP23A-203ENST00000570692 ALDH1L1O75891 902 aa19.25■□□□□ 0.67
TVP23A-203ENST00000570692 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
TVP23A-203ENST00000570692 KLHDC4Q8TBB5 520 aa19.25■□□□□ 0.67
TVP23A-203ENST00000570692 SRCIN1Q9C0H9 1055 aa19.25■□□□□ 0.67
TVP23A-203ENST00000570692 BICC1Q9H694 974 aaKnown RBP19.25■□□□□ 0.67
TVP23A-203ENST00000570692 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.25■□□□□ 0.67
TVP23A-203ENST00000570692 TRIM75PA6NK02 468 aa19.24■□□□□ 0.67
TVP23A-203ENST00000570692 CCDC84Q86UT8 332 aaPredicted RBP19.24■□□□□ 0.67
TVP23A-203ENST00000570692 WDR66Q8TBY9 1149 aa19.24■□□□□ 0.67
TVP23A-203ENST00000570692 C11orf49Q9H6J7 331 aa19.24■□□□□ 0.67
TVP23A-203ENST00000570692 EYSQ5T1H1 3165 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 HMGCRP04035 888 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 FGFR2P21802 821 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 PRDX5P30044 214 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
TVP23A-203ENST00000570692 TREML2Q5T2D2 321 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 ANKRD44Q8N8A2 993 aa19.23■□□□□ 0.67
TVP23A-203ENST00000570692 IFIT1P09914 478 aaKnown RBP19.22■□□□□ 0.67
TVP23A-203ENST00000570692 PUM3Q15397 648 aaKnown RBP19.22■□□□□ 0.67
TVP23A-203ENST00000570692 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
TVP23A-203ENST00000570692 SH3BP5LQ7L8J4 393 aa19.22■□□□□ 0.67
TVP23A-203ENST00000570692 HMX1Q9NP08 348 aaPredicted RBP19.22■□□□□ 0.67
TVP23A-203ENST00000570692 AGTPBP1Q9UPW5 1226 aa19.22■□□□□ 0.67
TVP23A-203ENST00000570692 RPTORQ8N122 1335 aa19.22■□□□□ 0.67
TVP23A-203ENST00000570692 AK9Q5TCS8 1911 aa19.21■□□□□ 0.67
TVP23A-203ENST00000570692 RGS3P49796 1198 aa19.21■□□□□ 0.67
TVP23A-203ENST00000570692 GUCD1Q96NT3 240 aa19.21■□□□□ 0.67
TVP23A-203ENST00000570692 GJD2Q9UKL4 321 aa19.21■□□□□ 0.67
TVP23A-203ENST00000570692 LRRFIP2Q9Y608 721 aaKnown RBP19.21■□□□□ 0.67
TVP23A-203ENST00000570692 KIF16BQ96L93 1317 aa19.21■□□□□ 0.67
TVP23A-203ENST00000570692 FAM110CQ1W6H9 321 aa19.2■□□□□ 0.66
TVP23A-203ENST00000570692 OGDHLQ9ULD0 1010 aa19.2■□□□□ 0.66
TVP23A-203ENST00000570692 UTYO14607 1347 aa19.2■□□□□ 0.66
TVP23A-203ENST00000570692 PFASO15067 1338 aa19.2■□□□□ 0.66
TVP23A-203ENST00000570692 DDX60LQ5H9U9 1706 aaKnown RBP19.2■□□□□ 0.66
TVP23A-203ENST00000570692 CACNA1FO60840 1977 aa19.19■□□□□ 0.66
TVP23A-203ENST00000570692 LDHBP07195 334 aaKnown RBP19.19■□□□□ 0.66
TVP23A-203ENST00000570692 ZSCAN29Q8IWY8 852 aaPredicted RBP19.19■□□□□ 0.66
TVP23A-203ENST00000570692 FAM161BQ96MY7 647 aa19.19■□□□□ 0.66
TVP23A-203ENST00000570692 DDTLA6NHG4 134 aaPredicted RBP19.18■□□□□ 0.66
TVP23A-203ENST00000570692 POTEB2H3BUK9 544 aa19.18■□□□□ 0.66
TVP23A-203ENST00000570692 CTNND1O60716 968 aaKnown RBP19.18■□□□□ 0.66
TVP23A-203ENST00000570692 MDM2Q00987 491 aaPredicted RBP19.18■□□□□ 0.66
TVP23A-203ENST00000570692 MAP3K10Q02779 954 aa19.18■□□□□ 0.66
TVP23A-203ENST00000570692 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
TVP23A-203ENST00000570692 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
TVP23A-203ENST00000570692 ENTPD3O75355 529 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 SLC5A1P13866 664 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 TRIB2Q92519 343 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 IDI2Q9BXS1 227 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 PNMA3Q9UL41 463 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 DOCK3Q8IZD9 2030 aa19.17■□□□□ 0.66
TVP23A-203ENST00000570692 DOCK2Q92608 1830 aa19.16■□□□□ 0.66
TVP23A-203ENST00000570692 LPIN2Q92539 896 aa19.16■□□□□ 0.66
TVP23A-203ENST00000570692 PTPRFP10586 1907 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 DNAH12Q6ZR08 3092 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 COL6A1P12109 1028 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 GCLCP48506 637 aaPredicted RBP19.15■□□□□ 0.66
TVP23A-203ENST00000570692 LRRC26Q2I0M4 334 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 MAP3K21Q5TCX8 1036 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 FAM109BQ6ICB4 259 aaPredicted RBP19.15■□□□□ 0.66
TVP23A-203ENST00000570692 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
TVP23A-203ENST00000570692 PHIPQ8WWQ0 1821 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 RFX7Q2KHR2 1363 aa19.15■□□□□ 0.66
TVP23A-203ENST00000570692 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 PRKAR2AP13861 404 aaKnown RBP19.14■□□□□ 0.65
TVP23A-203ENST00000570692 CYP2B6P20813 491 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 SPP2Q13103 211 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 PICALMQ13492 652 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 PROCA1Q8NCQ7 364 aaPredicted RBP19.14■□□□□ 0.65
TVP23A-203ENST00000570692 PRUNE2Q8WUY3 3088 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 DOCK1Q14185 1865 aa19.14■□□□□ 0.65
TVP23A-203ENST00000570692 EYA2O00167 538 aa19.13■□□□□ 0.65
TVP23A-203ENST00000570692 WDR63Q8IWG1 891 aa19.13■□□□□ 0.65
TVP23A-203ENST00000570692 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
TVP23A-203ENST00000570692 GAKO14976 1311 aa19.12■□□□□ 0.65
TVP23A-203ENST00000570692 SALL1Q9NSC2 1324 aa19.12■□□□□ 0.65
TVP23A-203ENST00000570692 PEX10O60683 326 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms