RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 DPP8Q6V1X1 898 aaPredicted RBP7.04□□□□□ -1.28
CYLD-216ENST00000569891 SYT1P21579 422 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 UBE2HP62256 183 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 ME3Q16798 604 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 BRAPQ7Z569 592 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 AGXT2Q9BYV1 514 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 WWC3Q9ULE0 1092 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 NDUFB9Q9Y6M9 179 aa7.04□□□□□ -1.28
CYLD-216ENST00000569891 GOLGA8AA7E2F4 631 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 KCNQ4P56696 695 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 SCARF1Q14162 830 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 TRIM34Q9BYJ4 488 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 ARMT1Q9H993 441 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 ANAPC4Q9UJX5 808 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 ATP6V0A2Q9Y487 856 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 EXOSC10Q01780 885 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 PPARAQ07869 468 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 SSRP1Q08945 709 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 SF3A1Q15459 793 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 C8orf76Q96K31 380 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 TPCN1Q9ULQ1 816 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 ADAMTSL1Q8N6G6 1762 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 MINDY4BA8MYZ0 360 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 POLRMTO00411 1230 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 PRPF40AO75400 957 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 POLR3DP05423 398 aaPredicted RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 POLD1P28340 1107 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 HAND2P61296 217 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 STK3Q13188 491 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 RRP12Q5JTH9 1297 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 FAM177A1Q8N128 213 aaPredicted RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 TDRD7Q8NHU6 1098 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 CTCFLQ8NI51 663 aaPredicted RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 MYH7P12883 1935 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 EVCP57679 992 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 SBK1Q52WX2 424 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 ZNF444Q8N0Y2 327 aaPredicted RBP7.03□□□□□ -1.28
CYLD-216ENST00000569891 ZNF622Q969S3 477 aaKnown RBP eCLIP7.03□□□□□ -1.28
CYLD-216ENST00000569891 IL25Q9H293 177 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 LRRC4BQ9NT99 713 aa7.03□□□□□ -1.28
CYLD-216ENST00000569891 KLRG2A4D1S0 409 aaPredicted RBP7.02□□□□□ -1.29
CYLD-216ENST00000569891 HLA-DOAP06340 250 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 MMP14P50281 582 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 MB21D2Q8IYB1 491 aaPredicted RBP7.02□□□□□ -1.29
CYLD-216ENST00000569891 AKT1S1Q96B36 256 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 TMOD2Q9NZR1 351 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.29
CYLD-216ENST00000569891 CEP131Q9UPN4 1083 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 BMP15O95972 392 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 MMP10P09238 476 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 CCDC73Q6ZRK6 1079 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 PODNQ7Z5L7 613 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 C2CD5Q86YS7 1000 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 TMEM87AQ8NBN3 555 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 MKNK2Q9HBH9 465 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 ORC3Q9UBD5 711 aaPredicted RBP7.02□□□□□ -1.29
CYLD-216ENST00000569891 FOCADQ5VW36 1801 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 PTPDC1A2A3K4 754 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 TOB2Q14106 344 aaPredicted RBP7.02□□□□□ -1.29
CYLD-216ENST00000569891 RTN1Q16799 776 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 SGMS1Q86VZ5 419 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 SPATA32Q96LK8 384 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 LZTS2Q9BRK4 669 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 VPS33BQ9H267 617 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 CHD4Q14839 1912 aa7.02□□□□□ -1.29
CYLD-216ENST00000569891 ELP1O95163 1332 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 STK36Q9NRP7 1315 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 DDAH1O94760 285 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 CAVIN2O95810 425 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 FKBP1AP62942 108 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 APOBRQ0VD83 1088 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 SLC15A2Q16348 729 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 CD209Q9NNX6 404 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 MYO3BQ8WXR4 1341 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 CTAGE5O15320 804 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 IL1R1P14778 569 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 PPP4CP60510 307 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 IFIT1BQ5T764 474 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 PI16Q6UXB8 463 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 FBXW7Q969H0 707 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 DDX19AQ9NUU7 478 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 HDAC9Q9UKV0 1011 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 TSPY2A6NKD2 308 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 ORC4O43929 436 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 PDIA3P30101 505 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 RTKN2Q8IZC4 609 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 NECAB1Q8N987 351 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 MIGA1Q8NAN2 632 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 SMARCC2Q8TAQ2 1214 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 NSUN4Q96CB9 384 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 NOL7Q9UMY1 257 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 IQSEC3Q9UPP2 1182 aaPredicted RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 GSG1L2A8MUP6 293 aa7.01□□□□□ -1.29
CYLD-216ENST00000569891 SH2B2O14492 632 aaPredicted RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 RANBP6O60518 1105 aaKnown RBP7.01□□□□□ -1.29
CYLD-216ENST00000569891 KDM4AO75164 1064 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms