RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 SYNE4Q8N205 404 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CRACR2BQ8N4Y2 399 aaPredicted RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 IL17REQ8NFR9 667 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 SH2D4AQ9H788 454 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CDHR2Q9BYE9 1310 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CRYBG1Q9Y4K1 1723 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 GLTPD2A6NH11 291 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 TNNT3P45378 269 aaPredicted RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 SIRT2Q8IXJ6 389 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CCDC89Q8N998 374 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 ZNF784Q8NCA9 323 aaPredicted RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 VMP1Q96GC9 406 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 NUCKS1Q9H1E3 243 aaKnown RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 MTIF3Q9H2K0 278 aaKnown RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 DDX21Q9NR30 783 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMG1-217ENST00000569764 ZNRF3Q9ULT6 936 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 C21orf2O43822 256 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 UFL1O94874 794 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 INF2Q27J81 1249 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 TWISTNBQ3B726 338 aaPredicted RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 UBE2Q1Q7Z7E8 422 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CLASRPQ8N2M8 674 aaKnown RBP7.72□□□□□ -1.17
SMG1-217ENST00000569764 TBC1D31Q96DN5 1066 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 MPP4Q96JB8 637 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 RRAGCQ9HB90 399 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 GOPCQ9HD26 462 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 CHST12Q9NRB3 414 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 LEMD3Q9Y2U8 911 aa7.72□□□□□ -1.17
SMG1-217ENST00000569764 A0A0G2JLW4 131 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 CCDC85CA6NKD9 419 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 TRIM64CA6NLI5 447 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 IPO7O95373 1038 aaKnown RBP7.71□□□□□ -1.17
SMG1-217ENST00000569764 ZNF131P52739 623 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 RPS8P62241 208 aaKnown RBP7.71□□□□□ -1.17
SMG1-217ENST00000569764 CCDC191Q8NCU4 936 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 ZBTB40Q9NUA8 1239 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 ABCF2Q9UG63 623 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 PNMA3Q9UL41 463 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 TMCC3Q9ULS5 477 aa7.71□□□□□ -1.17
SMG1-217ENST00000569764 PRSS47A8MTI9 375 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 PDE8AO60658 829 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 TGFB3P10600 412 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 EPHX2P34913 555 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 BRDTQ58F21 947 aaPredicted RBP7.71□□□□□ -1.18
SMG1-217ENST00000569764 G2E3Q7L622 706 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 COL15A1P39059 1388 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 PHRF1Q9P1Y6 1649 aaKnown RBP7.71□□□□□ -1.18
SMG1-217ENST00000569764 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 TPM2P07951 284 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 SLMAPQ14BN4 828 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 DZIP1Q86YF9 867 aaKnown RBP7.71□□□□□ -1.18
SMG1-217ENST00000569764 PLBD2Q8NHP8 589 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 RANBP17Q9H2T7 1088 aaKnown RBP7.71□□□□□ -1.18
SMG1-217ENST00000569764 LGR6Q9HBX8 967 aa7.71□□□□□ -1.18
SMG1-217ENST00000569764 COL16A1Q07092 1604 aaPredicted RBP7.71□□□□□ -1.18
SMG1-217ENST00000569764 UBTFL1P0CB47 393 aaPredicted RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 CCT4P50991 539 aaKnown RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 GSE1Q14687 1217 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 PHC3Q8NDX5 983 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 ERO1AQ96HE7 468 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 HTATIP2Q9BUP3 242 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 ATG3Q9NT62 314 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 BCL9O00512 1426 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 USP42Q9H9J4 1324 aaKnown RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 BICDL2A1A5D9 508 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 TSPY2A6NKD2 308 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 TBC1D12O60347 775 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 FAM163BP0C2L3 166 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 TSPY3P0CV98 308 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 TSPY8P0CW00 308 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 CCNA1P78396 465 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 TSPY1Q01534 308 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 ITPRIPQ8IWB1 547 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 NKX2-3Q8TAU0 364 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 HELQQ8TDG4 1101 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 MKL1Q969V6 931 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.7□□□□□ -1.183e-7■■□□□ 13.5
SMG1-217ENST00000569764 IFT122Q9HBG6 1241 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 TMOD4Q9NZQ9 345 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 RABGAP1Q9Y3P9 1069 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 SLIT3O75094 1523 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 MAP3K15Q6ZN16 1313 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 IRS4O14654 1257 aaPredicted RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 KCNQ3O43525 872 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 SH3BGRP55822 239 aaPredicted RBP7.7□□□□□ -1.18
SMG1-217ENST00000569764 WASHC5Q12768 1159 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 SLC39A6Q13433 755 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 METTL24Q5JXM2 366 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 FAM161BQ96MY7 647 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 COL18A1P39060 1754 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 KIF5CO60282 957 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 ARL10Q8N8L6 244 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 VEZTQ9HBM0 779 aa7.7□□□□□ -1.18
SMG1-217ENST00000569764 XBP1P17861 261 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms