RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 CLRN2A0PK11 232 aa28.03■■■□□ 2.08
RAB40C-212ENST00000569575 APPP05067 770 aa28.03■■■□□ 2.08
RAB40C-212ENST00000569575 ZNF526Q8TF50 670 aaPredicted RBP28.03■■■□□ 2.08
RAB40C-212ENST00000569575 ARPP21Q9UBL0 812 aaPredicted RBP28.03■■■□□ 2.08
RAB40C-212ENST00000569575 CDK5RAP2Q96SN8 1893 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 ATRNL1Q5VV63 1379 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 FLT1P17948 1338 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 SBK1Q52WX2 424 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 TTC6Q86TZ1 520 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 IFNL3Q8IZI9 196 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 OSBPL5Q9H0X9 879 aaPredicted RBP28.02■■■□□ 2.08
RAB40C-212ENST00000569575 FAM198AQ9UFP1 575 aa28.02■■■□□ 2.08
RAB40C-212ENST00000569575 CCDC129Q6ZRS4 1044 aa28.01■■■□□ 2.07
RAB40C-212ENST00000569575 NAPBQ9H115 298 aa28.01■■■□□ 2.07
RAB40C-212ENST00000569575 DEFB129Q9H1M3 183 aa28.01■■■□□ 2.07
RAB40C-212ENST00000569575 CLEC11AQ9Y240 323 aa28.01■■■□□ 2.07
RAB40C-212ENST00000569575 NFIAQ12857 509 aa28■■■□□ 2.07
RAB40C-212ENST00000569575 SDR42E1Q8WUS8 393 aa28■■■□□ 2.07
RAB40C-212ENST00000569575 MAP4K1Q92918 833 aa28■■■□□ 2.07
RAB40C-212ENST00000569575 U3KPZ7 1027 aaPredicted RBP28■■■□□ 2.07
RAB40C-212ENST00000569575 TCP10L2B9ZVM9 353 aa27.99■■■□□ 2.07
RAB40C-212ENST00000569575 PRKAB2O43741 272 aa27.99■■■□□ 2.07
RAB40C-212ENST00000569575 RASA3Q14644 834 aa27.99■■■□□ 2.07
RAB40C-212ENST00000569575 KRT26Q7Z3Y9 468 aa27.99■■■□□ 2.07
RAB40C-212ENST00000569575 MCM9Q9NXL9 1143 aa27.99■■■□□ 2.07
RAB40C-212ENST00000569575 HLA-DOAP06340 250 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 TDO2P48775 406 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 NT5C2P49902 561 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 PICALMQ13492 652 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 SUPT20HL1Q3ZLR7 823 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 C8orf34Q49A92 452 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 CHADLQ6NUI6 762 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 FOXP4Q8IVH2 680 aaPredicted RBP27.98■■■□□ 2.07
RAB40C-212ENST00000569575 MAPKAPK5Q8IW41 473 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 ANO2Q9NQ90 1003 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 DDX4Q9NQI0 724 aaKnown RBP27.98■■■□□ 2.07
RAB40C-212ENST00000569575 PI4KBQ9UBF8 816 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 CNTNAP1P78357 1384 aa27.98■■■□□ 2.07
RAB40C-212ENST00000569575 POLR2AP24928 1970 aaKnown RBP27.97■■■□□ 2.07
RAB40C-212ENST00000569575 FGAP02671 866 aa27.97■■■□□ 2.07
RAB40C-212ENST00000569575 LSG1Q9H089 658 aaKnown RBP27.97■■■□□ 2.07
RAB40C-212ENST00000569575 EHD4Q9H223 541 aa27.97■■■□□ 2.07
RAB40C-212ENST00000569575 IL25Q9H293 177 aa27.97■■■□□ 2.07
RAB40C-212ENST00000569575 MYH1P12882 1939 aa27.96■■■□□ 2.07
RAB40C-212ENST00000569575 KIF3CO14782 793 aa27.96■■■□□ 2.07
RAB40C-212ENST00000569575 POLR3DP05423 398 aaPredicted RBP27.96■■■□□ 2.07
RAB40C-212ENST00000569575 SLC3A2P08195 630 aaKnown RBP27.96■■■□□ 2.07
RAB40C-212ENST00000569575 PCP11498 1178 aaKnown RBP27.96■■■□□ 2.07
RAB40C-212ENST00000569575 CACNB3P54284 484 aa27.96■■■□□ 2.07
RAB40C-212ENST00000569575 VPS53Q5VIR6 699 aa27.96■■■□□ 2.07
RAB40C-212ENST00000569575 ZNF784Q8NCA9 323 aaPredicted RBP27.96■■■□□ 2.07
RAB40C-212ENST00000569575 ZNF287Q9HBT7 754 aa27.96■■■□□ 2.07
RAB40C-212ENST00000569575 ASTN2O75129 1339 aaPredicted RBP27.95■■■□□ 2.07
RAB40C-212ENST00000569575 FOXP2O15409 715 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 TBC1D12O60347 775 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 TOMM70O94826 608 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 TCP10Q12799 353 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 C12orf60Q5U649 245 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 ZSCAN29Q8IWY8 852 aaPredicted RBP27.95■■■□□ 2.06
RAB40C-212ENST00000569575 HERC5Q9UII4 1024 aaKnown RBP27.95■■■□□ 2.06
RAB40C-212ENST00000569575 ANAPC4Q9UJX5 808 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 NAV1Q8NEY1 1877 aa27.95■■■□□ 2.06
RAB40C-212ENST00000569575 USP17L12C9JPN9 530 aa27.94■■■□□ 2.06
RAB40C-212ENST00000569575 USP17L21D6R901 530 aa27.94■■■□□ 2.06
RAB40C-212ENST00000569575 RNF20Q5VTR2 975 aa27.94■■■□□ 2.06
RAB40C-212ENST00000569575 CTR9Q6PD62 1173 aa27.94■■■□□ 2.06
RAB40C-212ENST00000569575 METTL16Q86W50 562 aaKnown RBP27.94■■■□□ 2.06
RAB40C-212ENST00000569575 RBM46Q8TBY0 533 aaKnown RBP27.94■■■□□ 2.06
RAB40C-212ENST00000569575 EPB41L4AQ9HCS5 686 aaPredicted RBP27.94■■■□□ 2.06
RAB40C-212ENST00000569575 NF2P35240 595 aa27.93■■■□□ 2.06
RAB40C-212ENST00000569575 MAP3K10Q02779 954 aa27.93■■■□□ 2.06
RAB40C-212ENST00000569575 IMMTQ16891 758 aaKnown RBP27.93■■■□□ 2.06
RAB40C-212ENST00000569575 SMC1BQ8NDV3 1235 aa27.93■■■□□ 2.06
RAB40C-212ENST00000569575 TEPSINQ96N21 525 aa27.93■■■□□ 2.06
RAB40C-212ENST00000569575 DDX60LQ5H9U9 1706 aaKnown RBP27.92■■■□□ 2.06
RAB40C-212ENST00000569575 PTH1RQ03431 593 aa27.92■■■□□ 2.06
RAB40C-212ENST00000569575 DCAF15Q66K64 600 aa27.92■■■□□ 2.06
RAB40C-212ENST00000569575 CSRNP1Q96S65 589 aa27.92■■■□□ 2.06
RAB40C-212ENST00000569575 SWAP70Q9UH65 585 aa27.92■■■□□ 2.06
RAB40C-212ENST00000569575 PALD1Q9ULE6 856 aa27.92■■■□□ 2.06
RAB40C-212ENST00000569575 ZNF213O14771 459 aa27.91■■■□□ 2.06
RAB40C-212ENST00000569575 TMEM39BQ9GZU3 492 aa27.91■■■□□ 2.06
RAB40C-212ENST00000569575 UPF2Q9HAU5 1272 aaKnown RBP27.91■■■□□ 2.06
RAB40C-212ENST00000569575 SERPINB13Q9UIV8 391 aa27.91■■■□□ 2.06
RAB40C-212ENST00000569575 BAZ2AQ9UIF9 1905 aaKnown RBP27.9■■■□□ 2.06
RAB40C-212ENST00000569575 ROBO3Q96MS0 1386 aa27.9■■■□□ 2.06
RAB40C-212ENST00000569575 MCCP23508 829 aa27.9■■■□□ 2.06
RAB40C-212ENST00000569575 FSTL1Q12841 308 aa27.9■■■□□ 2.06
RAB40C-212ENST00000569575 USP48Q86UV5 1035 aa27.9■■■□□ 2.06
RAB40C-212ENST00000569575 ZFPM1Q8IX07 1006 aa27.9■■■□□ 2.06
RAB40C-212ENST00000569575 DDTLA6NHG4 134 aaPredicted RBP27.89■■■□□ 2.06
RAB40C-212ENST00000569575 POTEIP0CG38 1075 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 POTEJP0CG39 1038 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 PPARAQ07869 468 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 NECTIN1Q15223 517 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 MAP1SQ66K74 1059 aaPredicted RBP27.89■■■□□ 2.06
RAB40C-212ENST00000569575 SH3BP5LQ7L8J4 393 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 USP26Q9BXU7 913 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 BACH2Q9BYV9 841 aa27.89■■■□□ 2.06
RAB40C-212ENST00000569575 RNF41Q9H4P4 317 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms