RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ATN1P54259 1190 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 NOL9Q5SY16 702 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 ANKRD13CQ8N6S4 541 aa8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 ZNF112Q9UJU3 913 aa8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 ACACBO00763 2458 aa8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 A0A1B0GUL6 1792 aa8.66□□□□□ -1.02
HERPUD1-217ENST00000569429 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 PCCAP05165 728 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 IL1R1P14778 569 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 IGFBP4P22692 258 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 CACNB2Q08289 660 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 C15orf52Q6ZUT6 534 aaKnown RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 FAM83AQ86UY5 434 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 ANKRD2Q9GZV1 360 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 PRDM5Q9NQX1 630 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 PDLIM7Q9NR12 457 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 CFAP47Q6ZTR5 3102 aa8.65□□□□□ -1.02
HERPUD1-217ENST00000569429 CHD6Q8TD26 2715 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 CCND3P30281 292 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 EPHB4P54760 987 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 ERMP1Q7Z2K6 904 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 HERVK_113Q902F9 699 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 PBX4Q9BYU1 374 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 ATP11BQ9Y2G3 1177 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
HERPUD1-217ENST00000569429 TRIM43BA6NCK2 446 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 DNM1LO00429 736 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 SNX17Q15036 470 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 FKBP1CQ5VVH2 108 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 SLC39A5Q6ZMH5 540 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 MIGA2Q7L4E1 593 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 SH3RF1Q7Z6J0 888 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 TRIM43Q96BQ3 446 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 UIMC1Q96RL1 719 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 PHOX2BQ99453 314 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 TSPYL4Q9UJ04 414 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 TTF2Q9UNY4 1162 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 COG5Q9UP83 839 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 NUDCQ9Y266 331 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 DMDP11532 3685 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 GVINP1Q7Z2Y8 2422 aa8.63□□□□□ -1.03
HERPUD1-217ENST00000569429 ZBTB22O15209 634 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 RGS20O76081 388 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 CYP2B6P20813 491 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 ITGB8P26012 769 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 CRKP46108 304 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 GCLCP48506 637 aaPredicted RBP8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 CTSWP56202 376 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 CCDC191Q8NCU4 936 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 TTLL11Q8NHH1 800 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 LPAR1Q92633 364 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 NUDT12Q9BQG2 462 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 CD320Q9NPF0 282 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 TECTAO75443 2155 aa8.62□□□□□ -1.03
HERPUD1-217ENST00000569429 NCOR2Q9Y618 2525 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 ZFHX4Q86UP3 3567 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 MSCO60682 206 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 ALADP13716 330 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 ZKSCAN1P17029 563 aaPredicted RBP8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 IGHMBP2P38935 993 aaKnown RBP8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 PBX2P40425 430 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 KCNJ4P48050 445 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 GADL1Q6ZQY3 521 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 ZNF804AQ7Z570 1209 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 GREM2Q9H772 168 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 BABAM1Q9NWV8 329 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 CHPF2Q9P2E5 772 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 AGTPBP1Q9UPW5 1226 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 DAGLAQ9Y4D2 1042 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 AFG3L2Q9Y4W6 797 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 DOCK1Q14185 1865 aa8.61□□□□□ -1.03
HERPUD1-217ENST00000569429 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 KRT37O76014 449 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 POU3F3P20264 500 aaPredicted RBP8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 CACNB3P54284 484 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 HDLBPQ00341 1268 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 FPGSQ05932 587 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 TRIM60Q495X7 471 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 MFSD14BQ5SR56 506 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 CC2D1BQ5T0F9 858 aaKnown RBP8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 CCDC129Q6ZRS4 1044 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 TMOD2Q9NZR1 351 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 JAG2Q9Y219 1238 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 TACC3Q9Y6A5 838 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 LOC285556D6RIA3 1793 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 DNAH14Q0VDD8 3507 aa8.6□□□□□ -1.03
HERPUD1-217ENST00000569429 VPS13AQ96RL7 3174 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 MYBBP1AQ9BQG0 1328 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 MAP1BP46821 2468 aaKnown RBP8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 KIAA0355O15063 1070 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 PTPRAP18433 802 aa8.59□□□□□ -1.03
HERPUD1-217ENST00000569429 CHRNDQ07001 517 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms