RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
USB1-215ENST00000569252 FZD1Q9UP38 647 aa19.29■□□□□ 0.68
USB1-215ENST00000569252 MAGEB6P1A0A0J9YX57 407 aa19.28■□□□□ 0.68
USB1-215ENST00000569252 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
USB1-215ENST00000569252 USP40Q9NVE5 1235 aa19.28■□□□□ 0.68
USB1-215ENST00000569252 PAPPA2Q9BXP8 1791 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 GPR75-ASB3A0A0A6YYF3 556 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 SPDYE2BA6NHP3 402 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 SPDYE6P0CI01 402 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 BTDP43251 543 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 PRKG1Q13976 671 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 APPBP2Q92624 585 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 PRMT6Q96LA8 375 aaPredicted RBP19.27■□□□□ 0.68
USB1-215ENST00000569252 AATFQ9NY61 560 aaKnown RBP eCLIP19.27■□□□□ 0.68
USB1-215ENST00000569252 DAGLAQ9Y4D2 1042 aa19.27■□□□□ 0.68
USB1-215ENST00000569252 WNT10BO00744 389 aa19.26■□□□□ 0.67
USB1-215ENST00000569252 MFAP1P55081 439 aaKnown RBP19.26■□□□□ 0.67
USB1-215ENST00000569252 CTU1Q7Z7A3 348 aaKnown RBP19.26■□□□□ 0.67
USB1-215ENST00000569252 MIGA1Q8NAN2 632 aa19.26■□□□□ 0.67
USB1-215ENST00000569252 R3HDMLQ9H3Y0 253 aa19.26■□□□□ 0.67
USB1-215ENST00000569252 HELLSQ9NRZ9 838 aa19.26■□□□□ 0.67
USB1-215ENST00000569252 GAKO14976 1311 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 TNNI2P48788 182 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 PPP4CP60510 307 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 APOBEC3HQ6NTF7 200 aaKnown RBP19.25■□□□□ 0.67
USB1-215ENST00000569252 DDRGK1Q96HY6 314 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 TDRD3Q9H7E2 651 aaKnown RBP19.25■□□□□ 0.67
USB1-215ENST00000569252 VEZTQ9HBM0 779 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 HPS5Q9UPZ3 1129 aa19.25■□□□□ 0.67
USB1-215ENST00000569252 RFX7Q2KHR2 1363 aa19.24■□□□□ 0.67
USB1-215ENST00000569252 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
USB1-215ENST00000569252 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
USB1-215ENST00000569252 MCMDC2Q4G0Z9 681 aa19.24■□□□□ 0.67
USB1-215ENST00000569252 CWC27Q6UX04 472 aaKnown RBP19.24■□□□□ 0.67
USB1-215ENST00000569252 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
USB1-215ENST00000569252 USP5P45974 858 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 TNFAIP1Q13829 316 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 ZMYM1Q5SVZ6 1142 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 CDC42EP5Q6NZY7 148 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 TEX11Q8IYF3 940 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
USB1-215ENST00000569252 CRNKL1Q9BZJ0 848 aaKnown RBP19.23■□□□□ 0.67
USB1-215ENST00000569252 CLRN2A0PK11 232 aa19.22■□□□□ 0.67
USB1-215ENST00000569252 CDC45O75419 566 aa19.22■□□□□ 0.67
USB1-215ENST00000569252 GNAT2P19087 354 aa19.22■□□□□ 0.67
USB1-215ENST00000569252 APOBEC3FQ8IUX4 373 aaKnown RBP19.22■□□□□ 0.67
USB1-215ENST00000569252 ZNF70Q9UC06 446 aaPredicted RBP19.22■□□□□ 0.67
USB1-215ENST00000569252 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
USB1-215ENST00000569252 EIF5BO60841 1220 aaKnown RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 MBD4O95243 580 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 APPP05067 770 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 CHMLP26374 656 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 DYNLL1P63167 89 aaKnown RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 NMIQ13287 307 aaPredicted RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 SLFNL1Q499Z3 407 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 ADGRA1Q86SQ6 560 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 SH3RF3Q8TEJ3 882 aaPredicted RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
USB1-215ENST00000569252 ZBED3Q96IU2 234 aaPredicted RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 PUS7LQ9H0K6 701 aaKnown RBP19.21■□□□□ 0.67
USB1-215ENST00000569252 KIAA1211Q6ZU35 1233 aa19.2■□□□□ 0.66
USB1-215ENST00000569252 FAM227BQ96M60 508 aa19.2■□□□□ 0.66
USB1-215ENST00000569252 ARMT1Q9H993 441 aa19.2■□□□□ 0.66
USB1-215ENST00000569252 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
USB1-215ENST00000569252 TCP10L2B9ZVM9 353 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 GPAA1O43292 621 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 PICALMQ13492 652 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 FKBP1CQ5VVH2 108 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 TGFBRAP1Q8WUH2 860 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
USB1-215ENST00000569252 NACAP1Q9BZK3 213 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 HTTP42858 3142 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 MYH2Q9UKX2 1941 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 PITPNM2Q9BZ72 1349 aa19.19■□□□□ 0.66
USB1-215ENST00000569252 PATL2C9JE40 543 aaKnown RBP19.18■□□□□ 0.66
USB1-215ENST00000569252 M0R2C6 588 aa19.18■□□□□ 0.66
USB1-215ENST00000569252 CHGBP05060 677 aa19.18■□□□□ 0.66
USB1-215ENST00000569252 ZSCAN29Q8IWY8 852 aaPredicted RBP19.18■□□□□ 0.66
USB1-215ENST00000569252 LCORLQ8N3X6 602 aa19.18■□□□□ 0.66
USB1-215ENST00000569252 STRBPQ96SI9 672 aaKnown RBP19.18■□□□□ 0.66
USB1-215ENST00000569252 RIOK1Q9BRS2 568 aaKnown RBP19.18■□□□□ 0.66
USB1-215ENST00000569252 ATP8A2Q9NTI2 1148 aa19.18■□□□□ 0.66
USB1-215ENST00000569252 DOCK2Q92608 1830 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 A0A0D9SFI3 127 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 CACNB3P54284 484 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 RHBDL3P58872 404 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 TCP10Q12799 353 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 FAM83AQ86UY5 434 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 IDI2Q9BXS1 227 aa19.17■□□□□ 0.66
USB1-215ENST00000569252 MKI67P46013 3256 aaKnown RBP19.17■□□□□ 0.66
USB1-215ENST00000569252 MAST2Q6P0Q8 1798 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 GPR25O00155 361 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 ENTPD3O75355 529 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 HOOK2Q96ED9 719 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 DEFB129Q9H1M3 183 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 PPP2R3BQ9Y5P8 575 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 RAD50Q92878 1312 aa19.16■□□□□ 0.66
USB1-215ENST00000569252 CENPFP49454 3210 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms