RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TMED1Q13445 227 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 SLC30A9Q6PML9 568 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 GABPB2Q8TAK5 448 aaPredicted RBP7.93□□□□□ -1.14
CNOT1-216ENST00000569240 ARHGAP31Q2M1Z3 1444 aa7.93□□□□□ -1.14
CNOT1-216ENST00000569240 RGS16O15492 202 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 AK2P54819 239 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SESN3P58005 492 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ZC3H6P61129 1189 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 UBXN1Q04323 297 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 DHX32Q7L7V1 743 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SPDL1Q96EA4 605 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 CAPZA3Q96KX2 299 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 CHMLP26374 656 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 PLCD1P51178 756 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ADALQ6DHV7 355 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 RBM8AQ9Y5S9 174 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 PTPRGP23470 1445 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 I3L4J1 428 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 DHX37Q8IY37 1157 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 USP6NLQ92738 828 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SART1O43290 800 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 RPL13P26373 211 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ERCC5P28715 1186 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SEMA3FQ13275 785 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 PRPF4BQ13523 1007 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SLC9C1Q4G0N8 1177 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SDCCAG8Q86SQ7 713 aaPredicted RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 OR8K1Q8NGG5 319 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 RHPN1Q8TCX5 695 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 KCNK9Q9NPC2 374 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 RTL9Q8NET4 1388 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 TTC36A6NLP5 189 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 RRS1Q15050 365 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 TAF11Q15544 211 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 YY1P25490 414 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 PEX19P40855 299 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD20A4Q4UJ75 823 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD20A8PQ5CZ79 823 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD20A2Q5SQ80 823 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 ANKRD20A1Q5TYW2 823 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SUGP1Q8IWZ8 645 aaKnown RBP7.92□□□□□ -1.14
CNOT1-216ENST00000569240 IL1RAPL2Q9NP60 686 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 SYNJ1O43426 1573 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 GAPVD1Q14C86 1478 aa7.92□□□□□ -1.14
CNOT1-216ENST00000569240 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 CTIFO43310 598 aaKnown RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 MAP3K12Q12852 859 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 CHCHD3Q9NX63 227 aaKnown RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ZBTB12Q9Y330 459 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 CUL4AQ13619 759 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 HHATQ5VTY9 493 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 NAPBQ9H115 298 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ZFYVE9O95405 1425 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 HPDP32754 393 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 MRPS35P82673 323 aaKnown RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ITIH3Q06033 890 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ISM2Q6H9L7 571 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 MSANTD4Q8NCY6 345 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 FERMT2Q96AC1 680 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 CCDC97Q96F63 343 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ALG1Q9BT22 464 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 SNAPC4Q5SXM2 1469 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 STAT6P42226 847 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 COG7P83436 770 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 FAM96AQ9H5X1 160 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ZRANB1Q9UGI0 708 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 FAM169AQ9Y6X4 670 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ZNF449Q6P9G9 518 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 GAS2L3Q86XJ1 694 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 BSDC1Q9NW68 430 aaPredicted RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 HMGB3O15347 200 aaKnown RBP7.91□□□□□ -1.14
CNOT1-216ENST00000569240 GAS8O95995 478 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 KIF6Q6ZMV9 814 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 PPP1R13BQ96KQ4 1090 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 KIAA1468Q9P260 1216 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 MSH6P52701 1360 aa7.91□□□□□ -1.14
CNOT1-216ENST00000569240 ANO9A1A5B4 782 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 STX2P32856 288 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 CTNNA1P35221 906 aaKnown RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 TPD52P55327 224 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 MCMDC2Q4G0Z9 681 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 ZGPATQ8N5A5 531 aaKnown RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 GRK7Q8WTQ7 553 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 JPH4Q96JJ6 628 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 TARSL2A2RTX5 802 aaKnown RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 ZBTB43O43298 467 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 MAP3K7O43318 606 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 GNA14O95837 355 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 CHGBP05060 677 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 FBXO38Q6PIJ6 1188 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 TTLL7Q6ZT98 887 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 MCF2L2Q86YR7 1114 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 MKRN3Q13064 507 aaKnown RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 RPS6KA1Q15418 735 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 UIMC1Q96RL1 719 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 MAGEF1Q9HAY2 307 aa7.9□□□□□ -1.14
CNOT1-216ENST00000569240 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 IFIT1P09914 478 aaKnown RBP7.9□□□□□ -1.14
CNOT1-216ENST00000569240 CUL1Q13616 776 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms