RNA–Protein interactions for RNA: ENST00000569151.1

BBS4-216, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-216ENST00000569151 MSANTD4Q8NCY6 345 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 NKX2-3Q8TAU0 364 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 FAM71BQ8TC56 605 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 FUT8Q9BYC5 575 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 VIPAS39Q9H9C1 493 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 IL21Q9HBE4 155 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 MAP10Q9P2G4 905 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 RSPH14Q9UHP6 348 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 USP16Q9Y5T5 823 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 USP6P35125 1406 aa5.3□□□□□ -1.56
BBS4-216ENST00000569151 COL15A1P39059 1388 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 PLEKHG1Q9ULL1 1385 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 FMN2Q9NZ56 1722 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 FAM237AA0A1B0GTK4 181 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ZBTB7CA1YPR0 619 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 H3BQV1 296 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 SRGAP3O43295 1099 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 PFKFB2O60825 505 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 SURF6O75683 361 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 S1PR4O95977 384 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ATP2B1P20020 1258 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ADD1P35611 737 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 EVCP57679 992 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NLRP12P59046 1061 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 PPP2R3AQ06190 1150 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 TOB2Q14106 344 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 NR6A1Q15406 480 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ADCK5Q3MIX3 580 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 IFFO2Q5TF58 517 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NUTM2GQ5VZR2 741 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 TSHZ3Q63HK5 1081 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ARMCX5Q6P1M9 558 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 LARP1Q6PKG0 1096 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 CWC27Q6UX04 472 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 G2E3Q7L622 706 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 HDXQ7Z353 690 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 PPP1R42Q7Z4L9 355 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 BRAPQ7Z569 592 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 CCDC91Q7Z6B0 441 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NME9Q86XW9 330 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 HOMER1Q86YM7 354 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 FMR1NBQ8N0W7 255 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 FAM160A2Q8N612 972 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 AOPEPQ8N6M6 819 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NFATC2IPQ8NCF5 419 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NEK11Q8NG66 645 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 CTCFLQ8NI51 663 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 DNAAF4Q8WXU2 420 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 RUBCNQ92622 972 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ERCC4Q92889 916 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 SMARCE1Q969G3 411 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ZNF622Q969S3 477 aaKnown RBP eCLIP5.29□□□□□ -1.56
BBS4-216ENST00000569151 GJD4Q96KN9 370 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 DEF6Q9H4E7 631 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 A1CFQ9NQ94 594 aaKnown RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 ST7Q9NRC1 585 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 RTEL1Q9NZ71 1219 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 MYO1AQ9UBC5 1043 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 ADAM21Q9UKJ8 722 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 IQSEC3Q9UPP2 1182 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 JRKLQ9Y4A0 524 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NDUFB9Q9Y6M9 179 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 NRXN3Q9Y4C0 1643 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 KDM6AO15550 1401 aaPredicted RBP5.29□□□□□ -1.56
BBS4-216ENST00000569151 CARMIL3Q8ND23 1372 aa5.29□□□□□ -1.56
BBS4-216ENST00000569151 PEAK1Q9H792 1746 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 UTYO14607 1347 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 NEDD4P46934 1319 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 ADAMTSL3P82987 1691 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 F6X3S4 739 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 PPFIA4O75335 1185 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 SASH3O75995 380 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 CLSTN1O94985 981 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 CTHP32929 405 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 AARSP49588 968 aaKnown RBP eCLIP5.28□□□□□ -1.56
BBS4-216ENST00000569151 MYL5Q02045 173 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 PTH1RQ03431 593 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 APOBRQ0VD83 1088 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 DCTN1Q14203 1278 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 LONRF2Q1L5Z9 754 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 MSS51Q4VC12 460 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 MCTP2Q6DN12 878 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 GGT6Q6P531 493 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 MMS22LQ6ZRQ5 1243 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 MCM10Q7L590 875 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 TMC6Q7Z403 805 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 VSTM4Q8IW00 320 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.28□□□□□ -1.56
BBS4-216ENST00000569151 CCDC24Q8N4L8 307 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 CEP120Q8N960 986 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 BRF1Q92994 677 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 NUDT12Q9BQG2 462 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 XPO4Q9C0E2 1151 aaKnown RBP5.28□□□□□ -1.56
BBS4-216ENST00000569151 TRMT1Q9NXH9 659 aaKnown RBP5.28□□□□□ -1.56
BBS4-216ENST00000569151 HCSTQ9UBK5 93 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.28□□□□□ -1.56
BBS4-216ENST00000569151 TUBE1Q9UJT0 475 aa5.28□□□□□ -1.56
BBS4-216ENST00000569151 SPG7Q9UQ90 795 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms