RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ANKRD36CQ5JPF3 1778 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 WTIPA6NIX2 430 aaPredicted RBP11.42□□□□□ -0.58
CAPN3-219ENST00000569136 CIAO1O76071 339 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 PDE8BO95263 885 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 METTL24Q5JXM2 366 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 TTLL5Q6EMB2 1281 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 OGFOD1Q8N543 542 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 MEIS3Q99687 375 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 PUS3Q9BZE2 481 aaKnown RBP11.42□□□□□ -0.58
CAPN3-219ENST00000569136 CD209Q9NNX6 404 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 CEP126Q9P2H0 1117 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 PGAP2Q9UHJ9 254 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 GTF3C3Q9Y5Q9 886 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 SBF1O95248 1867 aa11.42□□□□□ -0.58
CAPN3-219ENST00000569136 SASH1O94885 1247 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 IL1R1P14778 569 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 HIBADHP31937 336 aaKnown RBP11.41□□□□□ -0.58
CAPN3-219ENST00000569136 RFX5P48382 616 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-219ENST00000569136 PTPN12Q05209 780 aaKnown RBP11.41□□□□□ -0.58
CAPN3-219ENST00000569136 MTX1Q13505 466 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 CAVIN4Q5BKX8 364 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 TXNRD3Q86VQ6 643 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 TMEM57Q8N5G2 664 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
CAPN3-219ENST00000569136 ANKLE1Q8NAG6 615 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
CAPN3-219ENST00000569136 MYO3BQ8WXR4 1341 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 ZBTB7BO15156 539 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 ZBTB24O43167 697 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 IFIT1P09914 478 aaKnown RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 IL15P40933 162 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 ZNF280AP59817 542 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 FKBP1AP62942 108 aaKnown RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 LRRC24Q50LG9 513 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 FBXO33Q7Z6M2 555 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 VPS37DQ86XT2 251 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 BANK1Q8NDB2 785 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 FAM84BQ96KN1 310 aaPredicted RBP11.4□□□□□ -0.58
CAPN3-219ENST00000569136 GMLQ99445 158 aa11.4□□□□□ -0.58
CAPN3-219ENST00000569136 SRGAP3O43295 1099 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 GTF2IP78347 998 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 PUM3Q15397 648 aaKnown RBP11.39□□□□□ -0.59
CAPN3-219ENST00000569136 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 CDC37L1Q7L3B6 337 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 TDRD7Q8NHU6 1098 aaKnown RBP11.39□□□□□ -0.59
CAPN3-219ENST00000569136 LPIN2Q92539 896 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 MAP10Q9P2G4 905 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
CAPN3-219ENST00000569136 SNAP23O00161 211 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 HIRAP54198 1017 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-219ENST00000569136 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 PDE3AQ14432 1141 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 MAP1SQ66K74 1059 aaPredicted RBP11.38□□□□□ -0.59
CAPN3-219ENST00000569136 ATG9AQ7Z3C6 839 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 ITPRIPQ8IWB1 547 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 KLHDC4Q8TBB5 520 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 GNL3LQ9NVN8 582 aaKnown RBP11.38□□□□□ -0.59
CAPN3-219ENST00000569136 AKAP2Q9Y2D5 859 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
CAPN3-219ENST00000569136 IRS2Q9Y4H2 1338 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 SLC5A1P13866 664 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 FGFR2P21802 821 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 KLRK1P26718 216 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 KCNH2Q12809 1159 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 G3BP1Q13283 466 aaKnown RBP eCLIP11.37□□□□□ -0.59
CAPN3-219ENST00000569136 VGLL2Q8N8G2 317 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 DCPSQ96C86 337 aaKnown RBP11.37□□□□□ -0.59
CAPN3-219ENST00000569136 HMX1Q9NP08 348 aaPredicted RBP11.37□□□□□ -0.59
CAPN3-219ENST00000569136 EVA1BQ9NVM1 165 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 TNNQ9UQP3 1299 aa11.37□□□□□ -0.59
CAPN3-219ENST00000569136 DDX60Q8IY21 1712 aaKnown RBP11.37□□□□□ -0.59
CAPN3-219ENST00000569136 COL4A5P29400 1685 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 FAM205AQ6ZU69 1335 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 PASKQ96RG2 1323 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 FRAT2O75474 233 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-219ENST00000569136 RLBP1P12271 317 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 GYG1P46976 350 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 NR6A1Q15406 480 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 KIF4BQ2VIQ3 1234 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 TBC1D10BQ4KMP7 808 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-219ENST00000569136 PLA2G2CQ5R387 149 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 DNAJC5GQ8N7S2 189 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 TBC1D22AQ8WUA7 517 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 MRIQ9BWK5 157 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 SIL1Q9H173 461 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 MYOZ2Q9NPC6 264 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 DDX19BQ9UMR2 479 aa11.36□□□□□ -0.59
CAPN3-219ENST00000569136 ZNF609O15014 1411 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 SCARF1Q14162 830 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 TRPM4Q8TD43 1214 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 SSH3Q8TE77 659 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
CAPN3-219ENST00000569136 DICER1Q9UPY3 1922 aaKnown RBP11.35□□□□□ -0.59
CAPN3-219ENST00000569136 DUOX1Q9NRD9 1551 aa11.34□□□□□ -0.59
CAPN3-219ENST00000569136 SHTN1A0MZ66 631 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms