RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DCDC2CA8MYV0 355 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 F6X3S4 739 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 NEFMP07197 916 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 HCLS1P14317 486 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ADMP35318 185 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 CDK8P49336 464 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 LIG3P49916 1009 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ST13P50502 369 aaKnown RBP5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 TTLL4Q14679 1199 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 LRRC14Q15048 493 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ZNF326Q5BKZ1 582 aaKnown RBP5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ZMYM1Q5SVZ6 1142 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ZDHHC13Q8IUH4 622 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 GATA6Q92908 595 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ACSBG1Q96GR2 724 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 DBNDD2Q9BQY9 259 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 LGR6Q9HBX8 967 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 PRKAG2Q9UGJ0 569 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 CSADQ9Y600 493 aa5.74□□□□□ -1.49
HMGB1P6-201ENST00000569046 ERCC6Q03468 1493 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 PRR19A6NJB7 356 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 TGFB1P01137 390 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 F13BP05160 661 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 TFE3P19532 575 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 NTF4P34130 210 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 RING1Q06587 406 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 INPP5AQ14642 412 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 PPM1JQ5JR12 505 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 PAOXQ6QHF9 649 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 AGMOQ6ZNB7 445 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 SLC51AQ86UW1 340 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 C12orf40Q86WS4 652 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 SHKBP1Q8TBC3 707 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 ATXN3LQ9H3M9 355 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 C1GALT1Q9NS00 363 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 PCDHA4Q9UN74 947 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 TLR6Q9Y2C9 796 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 DAGLAQ9Y4D2 1042 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 DCAF1Q9Y4B6 1507 aa5.73□□□□□ -1.49
HMGB1P6-201ENST00000569046 WDR64B1ANS9 1081 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 GSC2O15499 205 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 RPS26P62854 115 aaKnown RBP5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 ERVK-24P63145 666 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 SEPT6Q14141 434 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 LDLRAD1Q5T700 205 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 LRFN4Q6PJG9 635 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 UBE3DQ7Z6J8 389 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 FBXL6Q8N531 539 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 ISL2Q96A47 359 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 NOC4LQ9BVI4 516 aaKnown RBP5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 YIPF2Q9BWQ6 316 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 RNF112Q9ULX5 631 aa5.72□□□□□ -1.49
HMGB1P6-201ENST00000569046 RBM47A0AV96 593 aaKnown RBP5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 MED26O95402 600 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 MAP7Q14244 749 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 SCARA3Q6AZY7 606 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 SMYD4Q8IYR2 804 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 RNF214Q8ND24 703 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 PHC3Q8NDX5 983 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 TBC1D32Q96NH3 1257 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 PIDD1Q9HB75 910 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 CUX2O14529 1486 aa5.71□□□□□ -1.5
HMGB1P6-201ENST00000569046 NESP48681 1621 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 FAM170BA6NMN3 283 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 RNGTTO60942 597 aaKnown RBP5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 CDK5R2Q13319 367 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 ZAR1Q86SH2 424 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 RGS22Q8NE09 1264 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 PLPPR2Q96GM1 343 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
HMGB1P6-201ENST00000569046 HOXA10P31260 410 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 HNRNPUQ00839 825 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 ZBTB37Q5TC79 503 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 CYFIP1Q7L576 1253 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 Q8N3U1 123 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 ELMO3Q96BJ8 720 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 RHOVQ96L33 236 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 COPRSQ9NQ92 184 aa5.69□□□□□ -1.5
HMGB1P6-201ENST00000569046 GFRA2O00451 464 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 SSTR4P31391 388 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 WIPI1Q5MNZ9 446 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 BNC2Q6ZN30 1099 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 ZNF765Q7L2R6 523 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 JARID2Q92833 1246 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 PSMG3-AS1Q96PY0 264 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 RSRP1Q9BUV0 290 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 MIR1-1HGQ9H1L0 117 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 PCOLCE2Q9UKZ9 415 aa5.68□□□□□ -1.5
HMGB1P6-201ENST00000569046 PRAMEF27A3QJZ7 478 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 FANCGO15287 622 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 HYAL3O43820 417 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 PF4P02776 101 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 RLBP1P12271 317 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 GBP2P32456 591 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 CD97P48960 835 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 LMNB2Q03252 620 aa5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 CAMK2GQ13555 558 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P6-201ENST00000569046 ARTNQ5T4W7 220 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms