RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 AATFQ9NY61 560 aaKnown RBP eCLIP18.21■□□□□ 0.51
SNX20-204ENST00000568993 MINDY4BA8MYZ0 360 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 FIBPO43427 364 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 METAP2P50579 478 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX20-204ENST00000568993 PPP4CP60510 307 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 SART3Q15020 963 aaKnown RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 GPR101Q96P66 508 aaPredicted RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 SCAND2PQ9GZW5 306 aaPredicted RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 SENP2Q9HC62 589 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 DCP1AQ9NPI6 582 aaPredicted RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 RBM27Q9P2N5 1060 aaKnown RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 CPLX1O14810 134 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 ZBTB43O43298 467 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 RCAN1P53805 252 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 ESR2Q92731 530 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
SNX20-204ENST00000568993 JAG2Q9Y219 1238 aa18.2■□□□□ 0.5
SNX20-204ENST00000568993 CDKL5O76039 1030 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 LDHCP07864 332 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 XRCC6P12956 609 aaKnown RBP eCLIP18.19■□□□□ 0.5
SNX20-204ENST00000568993 CAMKK2Q96RR4 588 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 GRPEL1Q9HAV7 217 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 QSER1Q2KHR3 1735 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 LAMB1P07942 1786 aa18.19■□□□□ 0.5
SNX20-204ENST00000568993 NFXL1Q6ZNB6 911 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 CERS3Q8IU89 383 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 MASTLQ96GX5 879 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 ORC3Q9UBD5 711 aaPredicted RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 MYH15Q9Y2K3 1946 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 COL11A2P13942 1736 aaPredicted RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 USP17L21D6R901 530 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 RRP12Q5JTH9 1297 aaKnown RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 FAM173BQ6P4H8 233 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 CPLX2Q6PUV4 134 aaKnown RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 TTC6Q86TZ1 520 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 FAM217BQ9NTX9 383 aaPredicted RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 ARPP21Q9UBL0 812 aaPredicted RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 MKRN1Q9UHC7 482 aaKnown RBP18.18■□□□□ 0.5
SNX20-204ENST00000568993 SLC12A7Q9Y666 1083 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 FAM205AQ6ZU69 1335 aa18.18■□□□□ 0.5
SNX20-204ENST00000568993 CCDC69A6NI79 296 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 ORC4O43929 436 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 ADD1P35611 737 aaKnown RBP18.17■□□□□ 0.5
SNX20-204ENST00000568993 NT5C2P49902 561 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 WTAPQ15007 396 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 NTRK3Q16288 839 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 GRIK5Q16478 980 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 KLHL34Q8N239 644 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 TOMM22Q9NS69 142 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX20-204ENST00000568993 MYH2Q9UKX2 1941 aa18.17■□□□□ 0.5
SNX20-204ENST00000568993 ERICH2A1L162 156 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 C6orf229H3BNL8 230 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 BAG3O95817 575 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 CDC27P30260 824 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 SEC23AQ15436 765 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 FBXO18Q8NFZ0 1043 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 FAM163AQ96GL9 167 aaPredicted RBP18.16■□□□□ 0.5
SNX20-204ENST00000568993 SYNE3Q6ZMZ3 975 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 RAB11FIP4Q86YS3 637 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 COA1Q9GZY4 146 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 CFAP45Q9UL16 551 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 MROH7-TTC4A0A0A0MT08 1334 aa18.16■□□□□ 0.5
SNX20-204ENST00000568993 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 GOLGA8AA7E2F4 631 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 SMIM22K7EJ46 135 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 MICU3Q86XE3 530 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
SNX20-204ENST00000568993 C8orf76Q96K31 380 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 UBAC1Q9BSL1 405 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 SLC3A2P08195 630 aaKnown RBP18.15■□□□□ 0.5
SNX20-204ENST00000568993 PPP2R5BQ15173 497 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 EZH2Q15910 746 aaKnown RBP18.15■□□□□ 0.5
SNX20-204ENST00000568993 LRSAM1Q6UWE0 723 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 MPNDQ8N594 471 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 SPATA32Q96LK8 384 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
SNX20-204ENST00000568993 STK36Q9NRP7 1315 aa18.15■□□□□ 0.5
SNX20-204ENST00000568993 DLEC1Q9Y238 1755 aa18.14■□□□□ 0.49
SNX20-204ENST00000568993 DIXDC1Q155Q3 683 aa18.14■□□□□ 0.49
SNX20-204ENST00000568993 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
SNX20-204ENST00000568993 ZKSCAN3Q9BRR0 538 aa18.14■□□□□ 0.49
SNX20-204ENST00000568993 RTFDC1Q9BY42 306 aaPredicted RBP18.14■□□□□ 0.49
SNX20-204ENST00000568993 TNKSO95271 1327 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 GPR75-ASB3A0A0A6YYF3 556 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 PPFIA3O75145 1194 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 IFNAR1P17181 557 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 CCDC183Q5T5S1 534 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 MSL1Q68DK7 614 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 STYK1Q6J9G0 422 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 SLF2Q8IX21 1173 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 STK11IPQ8N1F8 1099 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 NOL10Q9BSC4 688 aaKnown RBP18.13■□□□□ 0.49
SNX20-204ENST00000568993 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 SUGT1Q9Y2Z0 365 aa18.13■□□□□ 0.49
SNX20-204ENST00000568993 CCDC196A0A1B0GTZ2 297 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms