RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 PCDHAC2Q9Y5I4 1007 aa13.72□□□□□ -0.21
CCNDBP1-214ENST00000568936 PPIP5K2O43314 1243 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 KDM4AO75164 1064 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 GIMAP6Q6P9H5 292 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 KLHL34Q8N239 644 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 DDX11L8A8MPP1 907 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 SCRN1Q12765 414 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 TGFBRAP1Q8WUH2 860 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 PSMD1Q99460 953 aa13.71□□□□□ -0.21
CCNDBP1-214ENST00000568936 MYH1P12882 1939 aa13.71□□□□□ -0.22
CCNDBP1-214ENST00000568936 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.22
CCNDBP1-214ENST00000568936 EVCP57679 992 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 FGD1P98174 961 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 STRIP1Q5VSL9 837 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 RTKN2Q8IZC4 609 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 NLGN2Q8NFZ4 835 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 IGDCC4Q8TDY8 1250 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 GTF3C6Q969F1 213 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 PFKFB2O60825 505 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 PRDM1O75626 825 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 BAG3O95817 575 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 FGRP09769 529 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 PDIA3P30101 505 aaKnown RBP13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 TRDNQ13061 729 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 MAPKAPK5Q8IW41 473 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 SUPT20HQ8NEM7 779 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 ZKSCAN3Q9BRR0 538 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 NCOA5Q9HCD5 579 aaKnown RBP13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
CCNDBP1-214ENST00000568936 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 CTDNEP1O95476 244 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 GJB2P29033 226 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 USP5P45974 858 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 SBK1Q52WX2 424 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 DALRD3Q5D0E6 543 aaKnown RBP13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 MCM9Q9NXL9 1143 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 HPS5Q9UPZ3 1129 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
CCNDBP1-214ENST00000568936 JAK2O60674 1132 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 CCT2P78371 535 aaKnown RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 ILDR2Q71H61 639 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 SAP30BPQ9UHR5 308 aaKnown RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 SMC3Q9UQE7 1217 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 PLCD1P51178 756 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 C12orf60Q5U649 245 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 ZNF274Q96GC6 653 aaPredicted RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 KRT23Q9C075 422 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 LY9Q9HBG7 655 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 TOMM22Q9NS69 142 aa13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.68□□□□□ -0.22
CCNDBP1-214ENST00000568936 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 NFKBIEO00221 500 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 BRD1O95696 1058 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 PTMSP20962 102 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 FKBP1AP62942 108 aaKnown RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 GRIPAP1Q4V328 841 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 DDX4Q9NQI0 724 aaKnown RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 ARPP21Q9UBL0 812 aaPredicted RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 ANGEL1Q9UNK9 670 aaKnown RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 FLT1P17948 1338 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 WDHD1O75717 1129 aaPredicted RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 RAD17O75943 681 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 SYT1P21579 422 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 CRKP46108 304 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 PRELPP51888 382 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 NUCB2P80303 420 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 SLF2Q8IX21 1173 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 NAP1L2Q9ULW6 460 aaPredicted RBP13.67□□□□□ -0.22
CCNDBP1-214ENST00000568936 ARFGEF1Q9Y6D6 1849 aa13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 SLC44A5Q8NCS7 719 aa13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 NSUN7Q8NE18 718 aaKnown RBP13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 TMEM87BQ96K49 555 aa13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 BCS1LQ9Y276 419 aa13.66□□□□□ -0.22
CCNDBP1-214ENST00000568936 IFIT3O14879 490 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-214ENST00000568936 RXRAP19793 462 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms