RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CDCA5Q96FF9 252 aa20.11■□□□□ 0.81
COMMD4-224ENST00000568877 OSBPL5Q9H0X9 879 aaPredicted RBP20.11■□□□□ 0.81
COMMD4-224ENST00000568877 SLC4A4Q9Y6R1 1079 aa20.11■□□□□ 0.81
COMMD4-224ENST00000568877 AK9Q5TCS8 1911 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 FLT1P17948 1338 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 PRKAB2O43741 272 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 GNAT2P19087 354 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
COMMD4-224ENST00000568877 CCDC129Q6ZRS4 1044 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 SDR42E1Q8WUS8 393 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 TEPSINQ96N21 525 aa20.1■□□□□ 0.81
COMMD4-224ENST00000568877 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
COMMD4-224ENST00000568877 ATP8A2Q9NTI2 1148 aa20.09■□□□□ 0.81
COMMD4-224ENST00000568877 RPAP1Q9BWH6 1393 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 POLR2AP24928 1970 aaKnown RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 PATL2C9JE40 543 aaKnown RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 SUPT20HL1Q3ZLR7 823 aa20.08■□□□□ 0.81
COMMD4-224ENST00000568877 NBPF12Q5TAG4 269 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 SH3BP5LQ7L8J4 393 aa20.08■□□□□ 0.81
COMMD4-224ENST00000568877 ZNF589Q86UQ0 364 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 ZSCAN29Q8IWY8 852 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 CDAN1Q8IWY9 1227 aa20.08■□□□□ 0.81
COMMD4-224ENST00000568877 RUFY2Q8WXA3 655 aa20.08■□□□□ 0.81
COMMD4-224ENST00000568877 DCP1AQ9NPI6 582 aaPredicted RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 MKRN1Q9UHC7 482 aaKnown RBP20.08■□□□□ 0.81
COMMD4-224ENST00000568877 CCDC171Q6TFL3 1326 aa20.07■□□□□ 0.8
COMMD4-224ENST00000568877 GSG1L2A8MUP6 293 aa20.07■□□□□ 0.8
COMMD4-224ENST00000568877 CDC45O75419 566 aa20.07■□□□□ 0.8
COMMD4-224ENST00000568877 MFAP1P55081 439 aaKnown RBP20.07■□□□□ 0.8
COMMD4-224ENST00000568877 SAP30BPQ9UHR5 308 aaKnown RBP20.07■□□□□ 0.8
COMMD4-224ENST00000568877 ATRNL1Q5VV63 1379 aa20.07■□□□□ 0.8
COMMD4-224ENST00000568877 RAD50Q92878 1312 aa20.06■□□□□ 0.8
COMMD4-224ENST00000568877 COL2A1P02458 1487 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-224ENST00000568877 DDTLA6NHG4 134 aaPredicted RBP20.06■□□□□ 0.8
COMMD4-224ENST00000568877 APPP05067 770 aa20.06■□□□□ 0.8
COMMD4-224ENST00000568877 NF2P35240 595 aa20.06■□□□□ 0.8
COMMD4-224ENST00000568877 DDRGK1Q96HY6 314 aa20.06■□□□□ 0.8
COMMD4-224ENST00000568877 DHX36Q9H2U1 1008 aaKnown RBP20.06■□□□□ 0.8
COMMD4-224ENST00000568877 ZNF408Q9H9D4 720 aa20.06■□□□□ 0.8
COMMD4-224ENST00000568877 CELF2O95319 508 aaKnown RBP20.05■□□□□ 0.8
COMMD4-224ENST00000568877 GIMAP6Q6P9H5 292 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 CASC1Q6TDU7 716 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 HOOK2Q96ED9 719 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 CSRNP1Q96S65 589 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 IL25Q9H293 177 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 MCM9Q9NXL9 1143 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 PALD1Q9ULE6 856 aa20.05■□□□□ 0.8
COMMD4-224ENST00000568877 FOCADQ5VW36 1801 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 SGSM2O43147 1006 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 CST9Q5W186 159 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 IFNL3Q8IZI9 196 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 NACAP1Q9BZK3 213 aa20.04■□□□□ 0.8
COMMD4-224ENST00000568877 EPB41L4AQ9HCS5 686 aaPredicted RBP20.04■□□□□ 0.8
COMMD4-224ENST00000568877 CDK5RAP2Q96SN8 1893 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 FOXP2O15409 715 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 POLR3DP05423 398 aaPredicted RBP20.03■□□□□ 0.8
COMMD4-224ENST00000568877 HLA-DOAP06340 250 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 HSPD1P10809 573 aaKnown RBP20.03■□□□□ 0.8
COMMD4-224ENST00000568877 TTC6Q86TZ1 520 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 PI4KBQ9UBF8 816 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 SSC5DA1L4H1 1573 aa20.03■□□□□ 0.8
COMMD4-224ENST00000568877 USP17L12C9JPN9 530 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 USP17L21D6R901 530 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 TDO2P48775 406 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 SLC4A8Q2Y0W8 1093 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 CTR9Q6PD62 1173 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 MIGA2Q7L4E1 593 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 ESYT1Q9BSJ8 1104 aa20.02■□□□□ 0.8
COMMD4-224ENST00000568877 PPP1R12BO60237 982 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-224ENST00000568877 PLCD1P51178 756 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 MAP3K10Q02779 954 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 ALX1Q15699 326 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 SBK1Q52WX2 424 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 DCAF15Q66K64 600 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 FOXP4Q8IVH2 680 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-224ENST00000568877 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 C2orf69Q8N8R5 385 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 NAPBQ9H115 298 aa20.01■□□□□ 0.79
COMMD4-224ENST00000568877 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-224ENST00000568877 ARPP21Q9UBL0 812 aaPredicted RBP20.01■□□□□ 0.79
COMMD4-224ENST00000568877 CYP2D6P10635 497 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 APLP1P51693 650 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 FKBP1BP68106 108 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 PRKG1Q13976 671 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 TTLL12Q14166 644 aaPredicted RBP20■□□□□ 0.79
COMMD4-224ENST00000568877 C12orf60Q5U649 245 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 METTL16Q86W50 562 aaKnown RBP20■□□□□ 0.79
COMMD4-224ENST00000568877 DSCC1Q9BVC3 393 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 FZD1Q9UP38 647 aa20■□□□□ 0.79
COMMD4-224ENST00000568877 DDX60LQ5H9U9 1706 aaKnown RBP19.99■□□□□ 0.79
COMMD4-224ENST00000568877 NAV1Q8NEY1 1877 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 TMEM88BA6NKF7 163 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 TBC1D12O60347 775 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 USP2O75604 605 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-224ENST00000568877 FGAP02671 866 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 SLURP2P0DP57 97 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 MOB2Q70IA6 237 aa19.99■□□□□ 0.79
COMMD4-224ENST00000568877 ARMC9Q7Z3E5 817 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms