RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 WFDC12Q8WWY7 111 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 PLPPR2Q96GM1 343 aa9.17□□□□□ -0.94
CYLD-213ENST00000568744 PRAMEF27A3QJZ7 478 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 GREM1O60565 184 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 ADH5P11766 374 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 NOS3P29474 1203 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 MCM4P33991 863 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 ID3Q02535 119 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 ANKRD34AQ69YU3 496 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 SMG8Q8ND04 991 aaKnown RBP9.16□□□□□ -0.94
CYLD-213ENST00000568744 NT5C1AQ9BXI3 368 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 CEP41Q9BYV8 373 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 PPP1R9AQ9ULJ8 1098 aa9.16□□□□□ -0.94
CYLD-213ENST00000568744 FAM221AA4D161 298 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 KRBA1A5PL33 1030 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 GAS2O43903 313 aaKnown RBP9.15□□□□□ -0.94
CYLD-213ENST00000568744 CILPO75339 1184 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 CRKP46108 304 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 RPL6Q02878 288 aaKnown RBP9.15□□□□□ -0.94
CYLD-213ENST00000568744 SOX4Q06945 474 aaPredicted RBP9.15□□□□□ -0.94
CYLD-213ENST00000568744 MBTPS1Q14703 1052 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 CWF19L2Q2TBE0 894 aaKnown RBP9.15□□□□□ -0.94
CYLD-213ENST00000568744 VPS37DQ86XT2 251 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 DCAF5Q96JK2 942 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 KCNQ5Q9NR82 932 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 CACNA2D2Q9NY47 1150 aa9.15□□□□□ -0.94
CYLD-213ENST00000568744 TMPRSS2O15393 492 aa9.14□□□□□ -0.95
CYLD-213ENST00000568744 DNAJA1P31689 397 aaKnown RBP9.14□□□□□ -0.95
CYLD-213ENST00000568744 MPP2Q14168 576 aa9.14□□□□□ -0.95
CYLD-213ENST00000568744 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
CYLD-213ENST00000568744 TINF2Q9BSI4 451 aa9.14□□□□□ -0.95
CYLD-213ENST00000568744 SUGCTQ9HAC7 445 aa9.14□□□□□ -0.95
CYLD-213ENST00000568744 ROBO2Q9HCK4 1378 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 GRIN3BO60391 1043 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 CHRNA4P43681 627 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 ASPAP45381 313 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 USP11P51784 963 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 ZC3H12AQ5D1E8 599 aaKnown RBP9.13□□□□□ -0.95
CYLD-213ENST00000568744 PPM1JQ5JR12 505 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 C8orf37Q96NL8 207 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 PIDD1Q9HB75 910 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 BRMS1Q9HCU9 246 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 SSU72Q9NP77 194 aaKnown RBP9.13□□□□□ -0.95
CYLD-213ENST00000568744 EFR3BQ9Y2G0 817 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 SNCAIPQ9Y6H5 919 aa9.13□□□□□ -0.95
CYLD-213ENST00000568744 C1QTNF9BB2RNN3 333 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 RNGTTO60942 597 aaKnown RBP9.12□□□□□ -0.95
CYLD-213ENST00000568744 PREPP48147 710 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 GJA8P48165 433 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 RASSF7Q02833 373 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 REC114Q7Z4M0 266 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 TXNRD3Q86VQ6 643 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 FANCD2OSQ96PS1 177 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 ATXN3LQ9H3M9 355 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 CRIM1Q9NZV1 1036 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 HIF3AQ9Y2N7 669 aa9.12□□□□□ -0.95
CYLD-213ENST00000568744 ETF1P62495 437 aaKnown RBP9.11□□□□□ -0.95
CYLD-213ENST00000568744 ARID5AQ03989 594 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 GK5Q6ZS86 529 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 C2CD4AQ8NCU7 369 aaPredicted RBP9.11□□□□□ -0.95
CYLD-213ENST00000568744 GINM1Q9NU53 330 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 PCDHGC5Q9Y5F6 944 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 ACTL7BQ9Y614 415 aa9.11□□□□□ -0.95
CYLD-213ENST00000568744 TIAF1O95411 115 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
CYLD-213ENST00000568744 RAB6AP20340 208 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 RXRBP28702 533 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
CYLD-213ENST00000568744 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 SPATA32Q96LK8 384 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 UBL7Q96S82 380 aaPredicted RBP9.1□□□□□ -0.95
CYLD-213ENST00000568744 LRRC3Q9BY71 257 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 DISC1Q9NRI5 854 aa9.1□□□□□ -0.95
CYLD-213ENST00000568744 PPP1R1BQ9UD71 204 aaPredicted RBP9.1□□□□□ -0.95
CYLD-213ENST00000568744 GFRA2O00451 464 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
CYLD-213ENST00000568744 ZNF165P49910 485 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 ERVK-24P63145 666 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 RASGRP4Q8TDF6 673 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 CPLX3Q8WVH0 158 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 FERD3LQ96RJ6 166 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.09□□□□□ -0.95
CYLD-213ENST00000568744 PCDHB14Q9Y5E9 798 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
CYLD-213ENST00000568744 SYNGAP1Q96PV0 1343 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 GDF11O95390 407 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 GRK4P32298 578 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 GATA4P43694 442 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 PDE4BQ07343 736 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 KCNMA1Q12791 1236 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 CDC37L1Q7L3B6 337 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 SLITRK4Q8IW52 837 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 TMEM151AQ8N4L1 468 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 SLC43A3Q8NBI5 491 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 TANGO6Q9C0B7 1094 aa9.08□□□□□ -0.96
CYLD-213ENST00000568744 KCNF1Q9H3M0 494 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms