RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 DDX4Q9NQI0 724 aaKnown RBP35.99■■■■□ 3.35
RAB40C-211ENST00000568586 ZAP70P43403 619 aa35.98■■■■□ 3.35
RAB40C-211ENST00000568586 KIF1BPQ96EK5 621 aa35.98■■■■□ 3.35
RAB40C-211ENST00000568586 GPR25O00155 361 aa35.97■■■■□ 3.35
RAB40C-211ENST00000568586 CAPN15O75808 1086 aa35.97■■■■□ 3.35
RAB40C-211ENST00000568586 AACSQ86V21 672 aa35.97■■■■□ 3.35
RAB40C-211ENST00000568586 R3HDMLQ9H3Y0 253 aa35.97■■■■□ 3.35
RAB40C-211ENST00000568586 RAB11FIP3O75154 756 aa35.96■■■■□ 3.35
RAB40C-211ENST00000568586 GTF2A2P52657 109 aa35.96■■■■□ 3.35
RAB40C-211ENST00000568586 DGKZQ13574 1117 aa35.96■■■■□ 3.35
RAB40C-211ENST00000568586 ZNF296Q8WUU4 475 aaPredicted RBP35.96■■■■□ 3.35
RAB40C-211ENST00000568586 INPP5BP32019 993 aa35.95■■■■□ 3.35
RAB40C-211ENST00000568586 PPP4CP60510 307 aa35.95■■■■□ 3.35
RAB40C-211ENST00000568586 NOL9Q5SY16 702 aaKnown RBP35.95■■■■□ 3.35
RAB40C-211ENST00000568586 OTUD7BQ6GQQ9 843 aa35.95■■■■□ 3.35
RAB40C-211ENST00000568586 OTUD5Q96G74 571 aa35.95■■■■□ 3.35
RAB40C-211ENST00000568586 PPIL2Q13356 520 aa35.94■■■■□ 3.34
RAB40C-211ENST00000568586 NAA16Q6N069 864 aaPredicted RBP35.94■■■■□ 3.34
RAB40C-211ENST00000568586 BRI3BPQ8WY22 251 aa35.94■■■■□ 3.34
RAB40C-211ENST00000568586 IL1RAPL2Q9NP60 686 aa35.94■■■■□ 3.34
RAB40C-211ENST00000568586 PIH1D3Q9NQM4 214 aaKnown RBP35.94■■■■□ 3.34
RAB40C-211ENST00000568586 DDTLA6NHG4 134 aaPredicted RBP35.93■■■■□ 3.34
RAB40C-211ENST00000568586 PHF20L1A8MW92 1017 aa35.93■■■■□ 3.34
RAB40C-211ENST00000568586 PPATQ06203 517 aa35.93■■■■□ 3.34
RAB40C-211ENST00000568586 CLASRPQ8N2M8 674 aaKnown RBP35.93■■■■□ 3.34
RAB40C-211ENST00000568586 COL2A1P02458 1487 aaPredicted RBP35.92■■■■□ 3.34
RAB40C-211ENST00000568586 CTU1Q7Z7A3 348 aaKnown RBP35.92■■■■□ 3.34
RAB40C-211ENST00000568586 AK9Q5TCS8 1911 aa35.91■■■■□ 3.34
RAB40C-211ENST00000568586 TMED8Q6PL24 325 aaPredicted RBP35.91■■■■□ 3.34
RAB40C-211ENST00000568586 MAST2Q6P0Q8 1798 aa35.91■■■■□ 3.34
RAB40C-211ENST00000568586 IRF6O14896 467 aa35.9■■■■□ 3.34
RAB40C-211ENST00000568586 PICALMQ13492 652 aa35.9■■■■□ 3.34
RAB40C-211ENST00000568586 CCL15-CCL14A0A0B4J2E2 113 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 TBC1D12O60347 775 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 BAG3O95817 575 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 CCL15Q16663 113 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 ADGRA1Q86SQ6 560 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 ZSCAN29Q8IWY8 852 aaPredicted RBP35.89■■■■□ 3.34
RAB40C-211ENST00000568586 DOCK2Q92608 1830 aa35.89■■■■□ 3.34
RAB40C-211ENST00000568586 FKTNO75072 461 aa35.88■■■■□ 3.33
RAB40C-211ENST00000568586 CETPP11597 493 aa35.88■■■■□ 3.33
RAB40C-211ENST00000568586 PLCG2P16885 1265 aa35.88■■■■□ 3.33
RAB40C-211ENST00000568586 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.88■■■■□ 3.33
RAB40C-211ENST00000568586 CRHR2Q13324 411 aa35.87■■■■□ 3.33
RAB40C-211ENST00000568586 SNAPC2Q13487 334 aa35.87■■■■□ 3.33
RAB40C-211ENST00000568586 TEX11Q8IYF3 940 aa35.87■■■■□ 3.33
RAB40C-211ENST00000568586 SH3RF3Q8TEJ3 882 aaPredicted RBP35.87■■■■□ 3.33
RAB40C-211ENST00000568586 NOL10Q9BSC4 688 aaKnown RBP35.87■■■■□ 3.33
RAB40C-211ENST00000568586 OSBPL5Q9H0X9 879 aaPredicted RBP35.87■■■■□ 3.33
RAB40C-211ENST00000568586 ZCCHC17Q9NP64 241 aaKnown RBP35.87■■■■□ 3.33
RAB40C-211ENST00000568586 KCNH4Q9UQ05 1017 aa35.87■■■■□ 3.33
RAB40C-211ENST00000568586 AATFQ9NY61 560 aaKnown RBP eCLIP35.86■■■■□ 3.33
RAB40C-211ENST00000568586 MYO5AQ9Y4I1 1855 aaKnown RBP35.86■■■■□ 3.33
RAB40C-211ENST00000568586 PKN2Q16513 984 aaKnown RBP35.84■■■■□ 3.33
RAB40C-211ENST00000568586 FAM43AQ8N2R8 423 aa35.84■■■■□ 3.33
RAB40C-211ENST00000568586 ANTXR1Q9H6X2 564 aa35.84■■■■□ 3.33
RAB40C-211ENST00000568586 APBB1O00213 710 aa35.83■■■■□ 3.33
RAB40C-211ENST00000568586 IFIT2P09913 472 aaKnown RBP35.83■■■■□ 3.33
RAB40C-211ENST00000568586 NDUFB9Q9Y6M9 179 aa35.83■■■■□ 3.33
RAB40C-211ENST00000568586 CTNND1O60716 968 aaKnown RBP35.82■■■■□ 3.32
RAB40C-211ENST00000568586 IDH1O75874 414 aaKnown RBP35.82■■■■□ 3.32
RAB40C-211ENST00000568586 SCYL3Q8IZE3 742 aa35.82■■■■□ 3.32
RAB40C-211ENST00000568586 CYP7A1P22680 504 aa35.81■■■■□ 3.32
RAB40C-211ENST00000568586 MAP3K12Q12852 859 aa35.81■■■■□ 3.32
RAB40C-211ENST00000568586 CERS3Q8IU89 383 aa35.81■■■■□ 3.32
RAB40C-211ENST00000568586 SLURP2P0DP57 97 aa35.8■■■■□ 3.32
RAB40C-211ENST00000568586 TTF1Q15361 905 aaPredicted RBP35.8■■■■□ 3.32
RAB40C-211ENST00000568586 DHX36Q9H2U1 1008 aaKnown RBP35.8■■■■□ 3.32
RAB40C-211ENST00000568586 BTBD19C9JJ37 291 aa35.79■■■■□ 3.32
RAB40C-211ENST00000568586 CXCL11O14625 94 aa35.79■■■■□ 3.32
RAB40C-211ENST00000568586 RRP1P56182 461 aaKnown RBP35.79■■■■□ 3.32
RAB40C-211ENST00000568586 PTPRAP18433 802 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 MOGSQ13724 837 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 MAGEB6Q8N7X4 407 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 LRRCC1Q9C099 1032 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 DCTPP1Q9H773 170 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 ZFYVE28Q9HCC9 887 aa35.78■■■■□ 3.32
RAB40C-211ENST00000568586 TAF1CQ15572 869 aaPredicted RBP35.77■■■■□ 3.32
RAB40C-211ENST00000568586 METTL16Q86W50 562 aaKnown RBP35.77■■■■□ 3.32
RAB40C-211ENST00000568586 TGFBRAP1Q8WUH2 860 aa35.77■■■■□ 3.32
RAB40C-211ENST00000568586 PICK1Q9NRD5 415 aa35.77■■■■□ 3.32
RAB40C-211ENST00000568586 PI4KBQ9UBF8 816 aa35.77■■■■□ 3.32
RAB40C-211ENST00000568586 ATP5JP18859 108 aa35.76■■■■□ 3.32
RAB40C-211ENST00000568586 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.76■■■■□ 3.32
RAB40C-211ENST00000568586 HERC5Q9UII4 1024 aaKnown RBP35.76■■■■□ 3.32
RAB40C-211ENST00000568586 FLT1P17948 1338 aa35.76■■■■□ 3.31
RAB40C-211ENST00000568586 CCDC85CA6NKD9 419 aa35.75■■■■□ 3.31
RAB40C-211ENST00000568586 DYNLL1P63167 89 aaKnown RBP35.75■■■■□ 3.31
RAB40C-211ENST00000568586 ANKRD23Q86SG2 305 aa35.75■■■■□ 3.31
RAB40C-211ENST00000568586 AFG3L2Q9Y4W6 797 aa35.75■■■■□ 3.31
RAB40C-211ENST00000568586 ZHX2Q9Y6X8 837 aa35.75■■■■□ 3.31
RAB40C-211ENST00000568586 FOCADQ5VW36 1801 aa35.74■■■■□ 3.31
RAB40C-211ENST00000568586 SP3Q02447 781 aa35.74■■■■□ 3.31
RAB40C-211ENST00000568586 CDK5RAP2Q96SN8 1893 aa35.73■■■■□ 3.31
RAB40C-211ENST00000568586 MAPKAPK5Q8IW41 473 aa35.73■■■■□ 3.31
RAB40C-211ENST00000568586 ERO1AQ96HE7 468 aa35.73■■■■□ 3.31
RAB40C-211ENST00000568586 TLR2O60603 784 aa35.72■■■■□ 3.31
RAB40C-211ENST00000568586 FBXO46Q6PJ61 603 aaPredicted RBP35.72■■■■□ 3.31
RAB40C-211ENST00000568586 FOXP4Q8IVH2 680 aaPredicted RBP35.72■■■■□ 3.31
RAB40C-211ENST00000568586 A0A0G2JLL6 359 aaPredicted RBP35.71■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms