RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	VPS37D	Q86XT2	251 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	RAET1E	Q8TD07	263 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	TEKT1	Q969V4	418 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	NEUROD6	Q96NK8	337 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	DBNDD2	Q9BQY9	259 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	DCTPP1	Q9H773	170 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	TMOD2	Q9NZR1	351 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	SRRD	Q9UH36	339 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	HDAC5	Q9UQL6	1122 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566	COL6A3	P12111	3177 aa		10.31	□□□□□ -0.76
TSC2-223	ENST00000568566		A0A1B0GUL7	405 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	PDHX	O00330	501 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	FRAT2	O75474	233 aa	Predicted RBP	10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	FMNL1	O95466	1100 aa	Predicted RBP	10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	CCL5	P13501	91 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	OSBP	P22059	807 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	GRK4	P32298	578 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	PRMT2	P55345	433 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	TNNI3K	Q59H18	835 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	C17orf99	Q6UX52	265 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	MIGA2	Q7L4E1	593 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	RHPN1	Q8TCX5	695 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	XAGE2	Q96GT9	111 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	BIN2	Q9UBW5	565 aa	Predicted RBP	10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	NDUFB9	Q9Y6M9	179 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	FPGT-TNNI3K	V9GXZ4	949 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	MYPN	Q86TC9	1320 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	ADGRA2	Q96PE1	1338 aa		10.3	□□□□□ -0.76
TSC2-223	ENST00000568566	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	INPP5B	P32019	993 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	PUM3	Q15397	648 aa	Known RBP	10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	DCAF15	Q66K64	600 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	UBE2Q1	Q7Z7E8	422 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	NKX2-3	Q8TAU0	364 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	TBC1D22A	Q8WUA7	517 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	ZDHHC15	Q96MV8	337 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	HTATIP2	Q9BUP3	242 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	ZNF341	Q9BYN7	854 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	RNF208	Q9H0X6	261 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	SNRK	Q9NRH2	765 aa		10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	DBNL	Q9UJU6	430 aa	Known RBP	10.29	□□□□□ -0.76
TSC2-223	ENST00000568566	FARP2	O94887	1054 aa	Predicted RBP	10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	GJB1	P08034	283 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	SLC5A1	P13866	664 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	HOXD10	P28358	340 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	GJA8	P48165	433 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	HDLBP	Q00341	1268 aa	Known RBP	10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	PRKCZ	Q05513	592 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	PPAT	Q06203	517 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	TSHZ3	Q63HK5	1081 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	CCDC102B	Q68D86	513 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	APOBEC3H	Q6NTF7	200 aa	Known RBP	10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	ANKRD23	Q86SG2	305 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	FAM83A	Q86UY5	434 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	LPIN2	Q92539	896 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	HOOK2	Q96ED9	719 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	PRO3102	Q9H379	93 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	FBXO3	Q9UK99	471 aa		10.28	□□□□□ -0.76
TSC2-223	ENST00000568566	AK9	Q5TCS8	1911 aa		10.27	□□□□□ -0.76
TSC2-223	ENST00000568566	DLL1	O00548	723 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	IFIT1	P09914	478 aa	Known RBP	10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	MOGS	Q13724	837 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	CAVIN4	Q5BKX8	364 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	FKBP1C	Q5VVH2	108 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	B4GALNT3	Q6L9W6	998 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	TBC1D9	Q6ZT07	1266 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	AACS	Q86V21	672 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	SLC17A8	Q8NDX2	589 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	U2AF1L4	Q8WU68	220 aa	Known RBP	10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	PARK7	Q99497	189 aa	Known RBP	10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	UNC93B1	Q9H1C4	597 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	KCNH4	Q9UQ05	1017 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	MGAM	O43451	1857 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	MAST3	O60307	1309 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	MYH13	Q9UKX3	1938 aa		10.27	□□□□□ -0.77
TSC2-223	ENST00000568566	SOX1	O00570	391 aa	Predicted RBP	10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	HMMR	O75330	724 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	CYP2C8	P10632	490 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	FCGRT	P55899	365 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	UBXN2A	P68543	259 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	TCP10	Q12799	353 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	RASGRF1	Q13972	1273 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	EDC3	Q96F86	508 aa	Known RBP	10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	NR2E3	Q9Y5X4	410 aa		10.26	□□□□□ -0.77
TSC2-223	ENST00000568566	CHGB	P05060	677 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	BCR	P11274	1271 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	MCAM	P43121	646 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	NFIA	Q12857	509 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	HDAC1	Q13547	482 aa	Predicted RBP	10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	DIXDC1	Q155Q3	683 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	SLFNL1	Q499Z3	407 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	ANKRD45	Q5TZF3	282 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	HHIPL2	Q6UWX4	724 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	SLAIN1	Q8ND83	568 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	LRCH3	Q96II8	777 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	CHMP4B	Q9H444	224 aa	Known RBP	10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	HMG20B	Q9P0W2	317 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	GABRQ	Q9UN88	632 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	DAGLA	Q9Y4D2	1042 aa		10.25	□□□□□ -0.77
TSC2-223	ENST00000568566	ADCY3	O60266	1144 aa		10.24	□□□□□ -0.77

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