RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CBLL1Q75N03 491 aa6.45□□□□□ -1.38
CDH1-211ENST00000567320 NETO1Q8TDF5 533 aa6.45□□□□□ -1.38
CDH1-211ENST00000567320 LEFTY1O75610 366 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 JUNBP17275 347 aaPredicted RBP6.44□□□□□ -1.38
CDH1-211ENST00000567320 NME2P22392 152 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 MAPK8P45983 427 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 TPTE2Q6XPS3 522 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 SPRED2Q7Z698 418 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 STK35Q8TDR2 534 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 MISP3Q96FF7 219 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 SAMM50Q9Y512 469 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 CSADQ9Y600 493 aa6.44□□□□□ -1.38
CDH1-211ENST00000567320 BIN1O00499 593 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 ITIH2P19823 946 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 COL19A1Q14993 1142 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 ZNF792Q3KQV3 632 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 OGFOD2Q6N063 350 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 PDZD3Q86UT5 571 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 TOP6BLQ8N6T0 577 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 GPBAR1Q8TDU6 330 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 ISL2Q96A47 359 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 PCDHGC5Q9Y5F6 944 aa6.43□□□□□ -1.38
CDH1-211ENST00000567320 BRD1O95696 1058 aa6.42□□□□□ -1.38
CDH1-211ENST00000567320 NEFMP07197 916 aa6.42□□□□□ -1.38
CDH1-211ENST00000567320 GSTT1P30711 240 aa6.42□□□□□ -1.38
CDH1-211ENST00000567320 ENOX2Q16206 610 aaKnown RBP6.42□□□□□ -1.38
CDH1-211ENST00000567320 DUSP23Q9BVJ7 150 aa6.42□□□□□ -1.38
CDH1-211ENST00000567320 TREHO43280 583 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 FBXO24O75426 580 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 CD8BP10966 210 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 ITGB5P18084 799 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 CD96P40200 585 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 IFI16Q16666 785 aaKnown RBP6.41□□□□□ -1.38
CDH1-211ENST00000567320 AOC3Q16853 763 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 ZC3H12AQ5D1E8 599 aaKnown RBP6.41□□□□□ -1.38
CDH1-211ENST00000567320 CDC37L1Q7L3B6 337 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 ZSCAN29Q8IWY8 852 aaPredicted RBP6.41□□□□□ -1.38
CDH1-211ENST00000567320 RNF214Q8ND24 703 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 PI4K2BQ8TCG2 481 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 HRASLS5Q96KN8 279 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 CEP44Q9C0F1 390 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 RC3H2Q9HBD1 1191 aaKnown RBP6.41□□□□□ -1.38
CDH1-211ENST00000567320 VAV3Q9UKW4 847 aa6.41□□□□□ -1.38
CDH1-211ENST00000567320 GNEQ9Y223 722 aaKnown RBP6.41□□□□□ -1.38
CDH1-211ENST00000567320 DCDC2CA8MYV0 355 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 CEACAM5P06731 702 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 ERVK-24P63145 666 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 PRKCQQ04759 706 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 DSC3Q14574 896 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 PPM1JQ5JR12 505 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 MPRIPQ6WCQ1 1025 aa6.4□□□□□ -1.38
CDH1-211ENST00000567320 NECAB3Q96P71 396 aaPredicted RBP6.4□□□□□ -1.38
CDH1-211ENST00000567320 TMEM265A0A087WTH1 108 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 ATP2B2Q01814 1243 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 C12orf40Q86WS4 652 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 GRIN3AQ8TCU5 1115 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 ELMO3Q96BJ8 720 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 PCDHA4Q9UN74 947 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 U3KQE9 123 aa6.39□□□□□ -1.39
CDH1-211ENST00000567320 FUT4P22083 530 aa6.38□□□□□ -1.39
CDH1-211ENST00000567320 OXCT1P55809 520 aa6.38□□□□□ -1.39
CDH1-211ENST00000567320 LRRC14Q15048 493 aa6.38□□□□□ -1.39
CDH1-211ENST00000567320 LLGL2Q6P1M3 1020 aa6.38□□□□□ -1.39
CDH1-211ENST00000567320 C3orf58Q8NDZ4 430 aa6.38□□□□□ -1.39
CDH1-211ENST00000567320 PAGE1O75459 146 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 PAPLNO95428 1278 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 ZNF252P-AS1Q0IIN9 211 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 FZD5Q13467 585 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 ANGEL2Q5VTE6 544 aaKnown RBP6.37□□□□□ -1.39
CDH1-211ENST00000567320 ALG1LQ6GMV1 187 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 FBF1Q8TES7 1133 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 SETDB2Q96T68 719 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 KRTAP9-4Q9BYQ2 154 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 SRCIN1Q9C0H9 1055 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 MKNK2Q9HBH9 465 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 PRDM10Q9NQV6 1147 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 SPG7Q9UQ90 795 aa6.37□□□□□ -1.39
CDH1-211ENST00000567320 GNAT3A8MTJ3 354 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 ENC1O14682 589 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 TRIM37O94972 964 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 RNASE1P07998 156 aaKnown RBP6.36□□□□□ -1.39
CDH1-211ENST00000567320 BMP6P22004 513 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 IKZF1Q13422 519 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 OSBPL7Q9BZF2 842 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 MBNL3Q9NUK0 354 aaKnown RBP6.36□□□□□ -1.39
CDH1-211ENST00000567320 WWC3Q9ULE0 1092 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 PPM1HQ9ULR3 514 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 PLAGL2Q9UPG8 496 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 IVNS1ABPQ9Y6Y0 642 aa6.36□□□□□ -1.39
CDH1-211ENST00000567320 PRAMEF27A3QJZ7 478 aa6.35□□□□□ -1.39
CDH1-211ENST00000567320 C8AP07357 584 aa6.35□□□□□ -1.39
CDH1-211ENST00000567320 ZNF648Q5T619 568 aaPredicted RBP6.35□□□□□ -1.39
CDH1-211ENST00000567320 ATG4DQ86TL0 474 aaPredicted RBP6.35□□□□□ -1.39
CDH1-211ENST00000567320 WFDC3Q8IUB2 231 aa6.35□□□□□ -1.39
CDH1-211ENST00000567320 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
CDH1-211ENST00000567320 FAM168AQ92567 244 aa6.35□□□□□ -1.39
CDH1-211ENST00000567320 HEXIM2Q96MH2 286 aaKnown RBP6.35□□□□□ -1.39
CDH1-211ENST00000567320 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms