RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 CXCL11O14625 94 aa19.32■□□□□ 0.68
PALB2-205ENST00000567003 GJB1P08034 283 aa19.32■□□□□ 0.68
PALB2-205ENST00000567003 CCDC84Q86UT8 332 aaPredicted RBP19.32■□□□□ 0.68
PALB2-205ENST00000567003 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
PALB2-205ENST00000567003 RFX7Q2KHR2 1363 aa19.32■□□□□ 0.68
PALB2-205ENST00000567003 DOCK1Q14185 1865 aa19.31■□□□□ 0.68
PALB2-205ENST00000567003 A0A0G2JLL6 359 aaPredicted RBP19.31■□□□□ 0.68
PALB2-205ENST00000567003 ELNP15502 786 aa19.31■□□□□ 0.68
PALB2-205ENST00000567003 PRRT2Q7Z6L0 340 aaPredicted RBP19.31■□□□□ 0.68
PALB2-205ENST00000567003 SCYL3Q8IZE3 742 aa19.31■□□□□ 0.68
PALB2-205ENST00000567003 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
PALB2-205ENST00000567003 SALL1Q9NSC2 1324 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 PTPRAP18433 802 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 UBXN2AP68543 259 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 ZSCAN29Q8IWY8 852 aaPredicted RBP19.3■□□□□ 0.68
PALB2-205ENST00000567003 NKX2-3Q8TAU0 364 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 U2AF1L4Q8WU68 220 aaKnown RBP19.3■□□□□ 0.68
PALB2-205ENST00000567003 DDX4Q9NQI0 724 aaKnown RBP19.3■□□□□ 0.68
PALB2-205ENST00000567003 PICK1Q9NRD5 415 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 GNL3LQ9NVN8 582 aaKnown RBP19.3■□□□□ 0.68
PALB2-205ENST00000567003 DENND2AQ9ULE3 1009 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 LAMA3Q16787 3333 aa19.3■□□□□ 0.68
PALB2-205ENST00000567003 DOCK3Q8IZD9 2030 aa19.29■□□□□ 0.68
PALB2-205ENST00000567003 DDTLA6NHG4 134 aaPredicted RBP19.29■□□□□ 0.68
PALB2-205ENST00000567003 FARP2O94887 1054 aaPredicted RBP19.29■□□□□ 0.68
PALB2-205ENST00000567003 UBTFL1P0CB47 393 aaPredicted RBP19.29■□□□□ 0.68
PALB2-205ENST00000567003 PICALMQ13492 652 aa19.29■□□□□ 0.68
PALB2-205ENST00000567003 SLAIN1Q8ND83 568 aa19.29■□□□□ 0.68
PALB2-205ENST00000567003 SMC4Q9NTJ3 1288 aa19.29■□□□□ 0.68
PALB2-205ENST00000567003 AFG3L2Q9Y4W6 797 aa19.29■□□□□ 0.68
PALB2-205ENST00000567003 LRRFIP2Q9Y608 721 aaKnown RBP19.29■□□□□ 0.68
PALB2-205ENST00000567003 GAKO14976 1311 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 E9PSI1 815 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 ADCY3O60266 1144 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 CIAO1O76071 339 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 INHAP05111 366 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 FLT3LGP49771 235 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 IDI2Q9BXS1 227 aa19.28■□□□□ 0.68
PALB2-205ENST00000567003 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 FAM196BA6NMK8 535 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 ENTPD3O75355 529 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 RASGRF1Q13972 1273 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 CCDC102BQ68D86 513 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
PALB2-205ENST00000567003 DZIP1Q86YF9 867 aaKnown RBP19.27■□□□□ 0.68
PALB2-205ENST00000567003 CDCA7LQ96GN5 454 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 HTATIP2Q9BUP3 242 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 ABCF2Q9UG63 623 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 TAOK2Q9UL54 1235 aa19.27■□□□□ 0.68
PALB2-205ENST00000567003 ALPK3Q96L96 1907 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 SEMA3EO15041 775 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 ZBTB7BO15156 539 aaPredicted RBP19.26■□□□□ 0.67
PALB2-205ENST00000567003 ZBTB22O15209 634 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 BTDP43251 543 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 SLFN5Q08AF3 891 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 PRO3102Q9H379 93 aa19.26■□□□□ 0.67
PALB2-205ENST00000567003 ZNF316A6NFI3 1004 aaPredicted RBP19.25■□□□□ 0.67
PALB2-205ENST00000567003 TNPO2O14787 897 aaKnown RBP19.25■□□□□ 0.67
PALB2-205ENST00000567003 SGPL1O95470 568 aa19.25■□□□□ 0.67
PALB2-205ENST00000567003 IL15P40933 162 aaPredicted RBP19.25■□□□□ 0.67
PALB2-205ENST00000567003 TIMM10P62072 90 aa19.25■□□□□ 0.67
PALB2-205ENST00000567003 TREML2Q5T2D2 321 aa19.25■□□□□ 0.67
PALB2-205ENST00000567003 SMCR8Q8TEV9 937 aaPredicted RBP19.25■□□□□ 0.67
PALB2-205ENST00000567003 DEFB118Q96PH6 123 aa19.25■□□□□ 0.67
PALB2-205ENST00000567003 FBXO3Q9UK99 471 aa19.25■□□□□ 0.67
PALB2-205ENST00000567003 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
PALB2-205ENST00000567003 MROH7-TTC4A0A0A0MT08 1334 aa19.24■□□□□ 0.67
PALB2-205ENST00000567003 COL6A3P12111 3177 aa19.24■□□□□ 0.67
PALB2-205ENST00000567003 MAP3K10Q02779 954 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 ZGPATQ8N5A5 531 aaKnown RBP19.23■□□□□ 0.67
PALB2-205ENST00000567003 ANKRD13CQ8N6S4 541 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 MEIS3Q99687 375 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 NOB1Q9ULX3 412 aaKnown RBP19.23■□□□□ 0.67
PALB2-205ENST00000567003 SLC45A1Q9Y2W3 748 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 NR2E3Q9Y5X4 410 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.23■□□□□ 0.67
PALB2-205ENST00000567003 ATAD5Q96QE3 1844 aa19.23■□□□□ 0.67
PALB2-205ENST00000567003 CTNND1O60716 968 aaKnown RBP19.22■□□□□ 0.67
PALB2-205ENST00000567003 TFRCP02786 760 aaKnown RBP19.22■□□□□ 0.67
PALB2-205ENST00000567003 RHBDL3P58872 404 aa19.22■□□□□ 0.67
PALB2-205ENST00000567003 COPRSQ9NQ92 184 aa19.22■□□□□ 0.67
PALB2-205ENST00000567003 AGTPBP1Q9UPW5 1226 aa19.22■□□□□ 0.67
PALB2-205ENST00000567003 LOC285556D6RIA3 1793 aa19.21■□□□□ 0.67
PALB2-205ENST00000567003 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
PALB2-205ENST00000567003 MECOMQ03112 1051 aa19.21■□□□□ 0.67
PALB2-205ENST00000567003 TFCP2Q12800 502 aa19.21■□□□□ 0.67
PALB2-205ENST00000567003 PI16Q6UXB8 463 aa19.21■□□□□ 0.67
PALB2-205ENST00000567003 DIS3LQ8TF46 1054 aaKnown RBP19.21■□□□□ 0.67
PALB2-205ENST00000567003 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
PALB2-205ENST00000567003 A0A1B0GUL7 405 aa19.2■□□□□ 0.66
PALB2-205ENST00000567003 EVI5O60447 810 aa19.2■□□□□ 0.66
PALB2-205ENST00000567003 IRF5Q13568 498 aa19.2■□□□□ 0.66
PALB2-205ENST00000567003 RRP1BQ14684 758 aaKnown RBP19.2■□□□□ 0.66
PALB2-205ENST00000567003 PXYLP1Q8TE99 480 aa19.2■□□□□ 0.66
PALB2-205ENST00000567003 FAM163AQ96GL9 167 aaPredicted RBP19.2■□□□□ 0.66
PALB2-205ENST00000567003 PAK6Q9NQU5 681 aaPredicted RBP19.2■□□□□ 0.66
PALB2-205ENST00000567003 TBC1D9Q6ZT07 1266 aa19.19■□□□□ 0.66
PALB2-205ENST00000567003 ERICH6Q7L0X2 663 aa19.19■□□□□ 0.66
PALB2-205ENST00000567003 SLF2Q8IX21 1173 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms