RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 ADAM21Q9UKJ8 722 aa17.97■□□□□ 0.47
COMMD4-215ENST00000566843 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 A0A1B0GUL7 405 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 H3BQF6 201 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 CNNM3Q8NE01 707 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 ENOX1Q8TC92 643 aaKnown RBP17.96■□□□□ 0.47
COMMD4-215ENST00000566843 CWC15Q9P013 229 aaKnown RBP17.96■□□□□ 0.47
COMMD4-215ENST00000566843 KCNH3Q9ULD8 1083 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 NT5DC1Q5TFE4 455 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 PDILTQ8N807 584 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 CLIC6Q96NY7 704 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 ATG3Q9NT62 314 aa17.96■□□□□ 0.47
COMMD4-215ENST00000566843 TJP1Q07157 1748 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 CDKL5O76039 1030 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 PHKG2P15735 406 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 USP5P45974 858 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 PIP4K2AP48426 406 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-215ENST00000566843 LRRC24Q50LG9 513 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 SRGAP1Q7Z6B7 1085 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 RALYLQ86SE5 291 aaKnown RBP17.95■□□□□ 0.46
COMMD4-215ENST00000566843 AIFM3Q96NN9 605 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 MAN1B1Q9UKM7 699 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 RAB21Q9UL25 225 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 ADKP55263 362 aaKnown RBP17.95■□□□□ 0.46
COMMD4-215ENST00000566843 MLKLQ8NB16 471 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
COMMD4-215ENST00000566843 TOM1O60784 492 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
COMMD4-215ENST00000566843 TUBB2AQ13885 445 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 CCDC191Q8NCU4 936 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 MSANTD4Q8NCY6 345 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 APPBP2Q92624 585 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 PANX2Q96RD6 677 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 TUBB2BQ9BVA1 445 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 MRPL44Q9H9J2 332 aaKnown RBP17.94■□□□□ 0.46
COMMD4-215ENST00000566843 HOOK1Q9UJC3 728 aaKnown RBP17.94■□□□□ 0.46
COMMD4-215ENST00000566843 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
COMMD4-215ENST00000566843 TUBB4BP68371 445 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 FMR1Q06787 632 aaKnown RBP eCLIP17.93■□□□□ 0.46
COMMD4-215ENST00000566843 NR1I3Q14994 352 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 BEND6Q5SZJ8 279 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-215ENST00000566843 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-215ENST00000566843 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
COMMD4-215ENST00000566843 RAI14Q9P0K7 980 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 DACH1Q9UI36 760 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 NFE2L3Q9Y4A8 694 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 GLI3P10071 1580 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 UBAP1LF5GYI3 381 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 ZNF213O14771 459 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 CHMP4BP1P59074 171 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 MORC3Q14149 939 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 WASHC4Q2M389 1173 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 RASSF4Q9H2L5 321 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 ANKZF1Q9H8Y5 726 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 ANGEL1Q9UNK9 670 aaKnown RBP17.93■□□□□ 0.46
COMMD4-215ENST00000566843 RGPD5Q99666 1765 aa17.93■□□□□ 0.46
COMMD4-215ENST00000566843 ABCC12Q96J65 1359 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 FOXN1O15353 648 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 CCDC175P0C221 793 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 ACTN2P35609 894 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 METAP2P50579 478 aaKnown RBP eCLIP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 KARSQ15046 597 aaKnown RBP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 CEP112Q8N8E3 955 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 KRI1Q8N9T8 703 aaKnown RBP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 TRIML1Q8N9V2 468 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 SH2B2O14492 632 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 TTC39AQ5SRH9 613 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 NUTM2AQ8IVF1 878 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 TTC5Q8N0Z6 440 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 DESI2Q9BSY9 194 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 NBPF3Q9H094 633 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 CWC25Q9NXE8 425 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.92■□□□□ 0.46
COMMD4-215ENST00000566843 CDC23Q9UJX2 597 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 NUP188Q5SRE5 1749 aa17.92■□□□□ 0.46
COMMD4-215ENST00000566843 A0A1B0GTH6 734 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 MYO1CO00159 1063 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 RPS6KA5O75582 802 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 GYS2P54840 703 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 FKBP4Q02790 459 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 POSTNQ15063 836 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 CPLX2Q6PUV4 134 aaKnown RBP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 HDXQ7Z353 690 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 RAPGEF4Q8WZA2 1011 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 MED15Q96RN5 788 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 ADGRG1Q9Y653 693 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 MYH7P12883 1935 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 AKR1B15C9JRZ8 316 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 LMAN1P49257 510 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 NTRK3Q16288 839 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 ZNF594Q96JF6 807 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-215ENST00000566843 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
COMMD4-215ENST00000566843 SRLQ86TD4 932 aa17.9■□□□□ 0.46
COMMD4-215ENST00000566843 STK11IPQ8N1F8 1099 aa17.9■□□□□ 0.46
COMMD4-215ENST00000566843 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms