RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 BRF1Q92994 677 aa20.93■□□□□ 0.94
HERC2-208ENST00000566635 SRCAPQ6ZRS2 3230 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 PRC1O43663 620 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 FGD1P98174 961 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 ST3GAL1Q11201 340 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 CYB5R4Q7L1T6 521 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 TEX11Q8IYF3 940 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 GPHNQ9NQX3 736 aaPredicted RBP20.92■□□□□ 0.94
HERC2-208ENST00000566635 MKRN1Q9UHC7 482 aaKnown RBP20.92■□□□□ 0.94
HERC2-208ENST00000566635 ANAPC4Q9UJX5 808 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 RAD17O75943 681 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 USP17L8P0C7I0 530 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 MCM5P33992 734 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 MFSD6Q6ZSS7 791 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 MAPKAPK5Q8IW41 473 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 UTRNP46939 3433 aa20.92■□□□□ 0.94
HERC2-208ENST00000566635 TEKT1Q969V4 418 aa20.91■□□□□ 0.94
HERC2-208ENST00000566635 VPS33BQ9H267 617 aa20.91■□□□□ 0.94
HERC2-208ENST00000566635 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
HERC2-208ENST00000566635 PCDHAC2Q9Y5I4 1007 aa20.91■□□□□ 0.94
HERC2-208ENST00000566635 ECM29Q5VYK3 1845 aa20.91■□□□□ 0.94
HERC2-208ENST00000566635 CRKP46108 304 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 RASSF7Q02833 373 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 RRP12Q5JTH9 1297 aaKnown RBP20.9■□□□□ 0.94
HERC2-208ENST00000566635 CERS3Q8IU89 383 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 CCDC83Q8IWF9 413 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 NIM1KQ8IY84 436 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 NECAB1Q8N987 351 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 ZSCAN31Q96LW9 406 aaPredicted RBP20.9■□□□□ 0.94
HERC2-208ENST00000566635 AGXT2Q9BYV1 514 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
HERC2-208ENST00000566635 TOMM22Q9NS69 142 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 ARPP21Q9UBL0 812 aaPredicted RBP20.9■□□□□ 0.94
HERC2-208ENST00000566635 PLCG2P16885 1265 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 APOBRQ0VD83 1088 aa20.9■□□□□ 0.94
HERC2-208ENST00000566635 SH2B1Q9NRF2 756 aaPredicted RBP20.9■□□□□ 0.94
HERC2-208ENST00000566635 FLT1P17948 1338 aa20.89■□□□□ 0.94
HERC2-208ENST00000566635 PSMD14O00487 310 aa20.89■□□□□ 0.94
HERC2-208ENST00000566635 STK3Q13188 491 aa20.89■□□□□ 0.94
HERC2-208ENST00000566635 HHIPL2Q6UWX4 724 aa20.89■□□□□ 0.94
HERC2-208ENST00000566635 DTNBO60941 627 aa20.89■□□□□ 0.93
HERC2-208ENST00000566635 KDM4AO75164 1064 aa20.89■□□□□ 0.93
HERC2-208ENST00000566635 SBK1Q52WX2 424 aa20.89■□□□□ 0.93
HERC2-208ENST00000566635 CNNM2Q9H8M5 875 aa20.89■□□□□ 0.93
HERC2-208ENST00000566635 SAP30BPQ9UHR5 308 aaKnown RBP20.89■□□□□ 0.93
HERC2-208ENST00000566635 ZNRF3Q9ULT6 936 aa20.89■□□□□ 0.93
HERC2-208ENST00000566635 MYH1P12882 1939 aa20.88■□□□□ 0.93
HERC2-208ENST00000566635 APOBEC3HQ6NTF7 200 aaKnown RBP20.88■□□□□ 0.93
HERC2-208ENST00000566635 INTS4Q96HW7 963 aaKnown RBP20.88■□□□□ 0.93
HERC2-208ENST00000566635 KRT23Q9C075 422 aa20.88■□□□□ 0.93
HERC2-208ENST00000566635 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
HERC2-208ENST00000566635 CHMP5Q9NZZ3 219 aa20.88■□□□□ 0.93
HERC2-208ENST00000566635 WDR19Q8NEZ3 1342 aa20.88■□□□□ 0.93
HERC2-208ENST00000566635 RSBN1LQ6PCB5 846 aaPredicted RBP20.87■□□□□ 0.93
HERC2-208ENST00000566635 PRDM1O75626 825 aa20.87■□□□□ 0.93
HERC2-208ENST00000566635 ZSWIM5Q9P217 1185 aa20.87■□□□□ 0.93
HERC2-208ENST00000566635 PRELPP51888 382 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 C12orf60Q5U649 245 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 CDC42EP5Q6NZY7 148 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 FBXL16Q8N461 479 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 ZDHHC15Q96MV8 337 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 USP40Q9NVE5 1235 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 ZBTB12Q9Y330 459 aaPredicted RBP20.86■□□□□ 0.93
HERC2-208ENST00000566635 RBM5P52756 815 aaKnown RBP eCLIP20.86■□□□□ 0.93
HERC2-208ENST00000566635 PICALMQ13492 652 aa20.86■□□□□ 0.93
HERC2-208ENST00000566635 LTBP3Q9NS15 1303 aa20.85■□□□□ 0.93
HERC2-208ENST00000566635 SH2B2O14492 632 aaPredicted RBP20.85■□□□□ 0.93
HERC2-208ENST00000566635 WDHD1O75717 1129 aaPredicted RBP20.85■□□□□ 0.93
HERC2-208ENST00000566635 VIL1P09327 827 aaKnown RBP20.85■□□□□ 0.93
HERC2-208ENST00000566635 SENP2Q9HC62 589 aa20.85■□□□□ 0.93
HERC2-208ENST00000566635 DDX4Q9NQI0 724 aaKnown RBP20.85■□□□□ 0.93
HERC2-208ENST00000566635 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
HERC2-208ENST00000566635 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.85■□□□□ 0.93
HERC2-208ENST00000566635 ROBO3Q96MS0 1386 aa20.85■□□□□ 0.93
HERC2-208ENST00000566635 HDLBPQ00341 1268 aaKnown RBP20.84■□□□□ 0.93
HERC2-208ENST00000566635 GTF3C6Q969F1 213 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 DYNLL2Q96FJ2 89 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 ZKSCAN3Q9BRR0 538 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 CWC22Q9HCG8 908 aaKnown RBP20.84■□□□□ 0.93
HERC2-208ENST00000566635 SERPINA10Q9UK55 444 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 NAP1L2Q9ULW6 460 aaPredicted RBP20.84■□□□□ 0.93
HERC2-208ENST00000566635 MYO3BQ8WXR4 1341 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 POLR3DP05423 398 aaPredicted RBP20.84■□□□□ 0.93
HERC2-208ENST00000566635 FGRP09769 529 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 PLCD1P51178 756 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 CXCL9Q07325 125 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 JDP2Q8WYK2 163 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 GMLQ99445 158 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 MRIQ9BWK5 157 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
HERC2-208ENST00000566635 ANGEL1Q9UNK9 670 aaKnown RBP20.84■□□□□ 0.93
HERC2-208ENST00000566635 PKP1Q13835 747 aa20.83■□□□□ 0.93
HERC2-208ENST00000566635 KLF18A0A0U1RQI7 1052 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 SCRN1Q12765 414 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 NFIAQ12857 509 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 CFAP100Q494V2 611 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 RAB11FIP4Q86YS3 637 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 AMOTL1Q8IY63 956 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 IGDCC4Q8TDY8 1250 aa20.83■□□□□ 0.92
HERC2-208ENST00000566635 ESR2Q92731 530 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms