RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 TMX4Q9H1E5 349 aaPredicted RBP12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 DBNDD1Q9H9R9 158 aa12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 NAP1L2Q9ULW6 460 aaPredicted RBP12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 TACC3Q9Y6A5 838 aa12.66□□□□□ -0.38
PDXDC1-214ENST00000566633 PSDA5PKW4 1024 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-214ENST00000566633 MINDY4BA8MYZ0 360 aa12.65□□□□□ -0.38
PDXDC1-214ENST00000566633 LDHBP07195 334 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-214ENST00000566633 EVCP57679 992 aa12.65□□□□□ -0.38
PDXDC1-214ENST00000566633 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
PDXDC1-214ENST00000566633 MCM5P33992 734 aa12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 CCT2P78371 535 aaKnown RBP12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 HMGN5P82970 282 aaKnown RBP12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 MFSD14BQ5SR56 506 aa12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.39
PDXDC1-214ENST00000566633 PTPDC1A2A3K4 754 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 ZNF500O60304 480 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 IL1R1P14778 569 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 C15orf52Q6ZUT6 534 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 SALL1Q9NSC2 1324 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 GOLGA6L4A6NEF3 574 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 B4E1Z4 1266 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 G3V3G9 751 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 RRP12Q5JTH9 1297 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 NCOA5Q9HCD5 579 aaKnown RBP12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 TOMM22Q9NS69 142 aa12.64□□□□□ -0.39
PDXDC1-214ENST00000566633 NRXN2Q9P2S2 1712 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 RGPD3A6NKT7 1758 aaPredicted RBP12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 RGPD4Q7Z3J3 1758 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 DPEP1P16444 411 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 ADD1P35611 737 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 STYK1Q6J9G0 422 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 NUP62CLQ9H1M0 184 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 DACT1Q9NYF0 836 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 USP25Q9UHP3 1055 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 NEDD4P46934 1319 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 KDM4AO75164 1064 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 CCDC192P0DO97 292 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 RALYLQ86SE5 291 aaKnown RBP12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
PDXDC1-214ENST00000566633 ANTXR2P58335 489 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 CAMK4Q16566 473 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 MAP3K11Q16584 847 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 CYB5R4Q7L1T6 521 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 NACAP1Q9BZK3 213 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 PRC1O43663 620 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 PRDM1O75626 825 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 OFD1O75665 1012 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 ADCY5O95622 1261 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 AOC3Q16853 763 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 ZKSCAN3Q9BRR0 538 aa12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 DDX19AQ9NUU7 478 aaKnown RBP12.62□□□□□ -0.39
PDXDC1-214ENST00000566633 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 USP17L12C9JPN9 530 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 USP17L21D6R901 530 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 FDPSP14324 419 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 GNAT2P19087 354 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 KCNA3P22001 575 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 TRDNQ13061 729 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 SPTY2D1Q68D10 685 aaPredicted RBP12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 SH3RF3Q8TEJ3 882 aaPredicted RBP12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 COA1Q9GZY4 146 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 SENP2Q9HC62 589 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 MYH7P12883 1935 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 CYP2D6P10635 497 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 SLC16A10Q8TF71 515 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 TNMDQ9H2S6 317 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 RCOR1Q9UKL0 485 aa12.61□□□□□ -0.39
PDXDC1-214ENST00000566633 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 NR1I2O75469 434 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 PTMAP06454 111 aaKnown RBP12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 SCNN1DP51172 638 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 PPARAQ07869 468 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 ALX1Q15699 326 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 CLSTN2Q9H4D0 955 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 RXRAP19793 462 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 ATL3Q6DD88 541 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 TTLL6Q8N841 843 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 DCP1AQ9NPI6 582 aaPredicted RBP12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 ZSWIM5Q9P217 1185 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 MRVI1Q9Y6F6 885 aa12.6□□□□□ -0.39
PDXDC1-214ENST00000566633 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms