RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDH1-209ENST00000566510 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 HPSEQ9Y251 543 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
CDH1-209ENST00000566510 ABCC12Q96J65 1359 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 FOXN1O15353 648 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 TOP1P11387 765 aaKnown RBP16.39■□□□□ 0.21
CDH1-209ENST00000566510 UBE3CQ15386 1083 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 RESP18Q5W5W9 173 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 METTL16Q86W50 562 aaKnown RBP16.39■□□□□ 0.21
CDH1-209ENST00000566510 PDILTQ8N807 584 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 MORC2Q9Y6X9 1032 aaPredicted RBP16.39■□□□□ 0.21
CDH1-209ENST00000566510 TMEM232C9JQI7 657 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 MAGEB6Q8N7X4 407 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 PIGBQ92521 554 aa16.39■□□□□ 0.21
CDH1-209ENST00000566510 BTBD18B2RXH4 712 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 SNAP23O00161 211 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 DHX8Q14562 1220 aaKnown RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 KRBA2Q6ZNG9 492 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 KRT222Q8N1A0 295 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 CUTAO60888 179 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 MBD4O95243 580 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 CDK11BP21127 795 aaKnown RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 NTRK3Q16288 839 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 CARD10Q9BWT7 1032 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CDH1-209ENST00000566510 ARMT1Q9H993 441 aa16.38■□□□□ 0.21
CDH1-209ENST00000566510 SAFBQ15424 915 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDH1-209ENST00000566510 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
CDH1-209ENST00000566510 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
CDH1-209ENST00000566510 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
CDH1-209ENST00000566510 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
CDH1-209ENST00000566510 NOSTRINQ8IVI9 506 aa16.37■□□□□ 0.21
CDH1-209ENST00000566510 URI1O94763 535 aaPredicted RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 KIF20AO95235 890 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 ETF1P62495 437 aaKnown RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 PDE4BQ07343 736 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 L2HGDHQ9H9P8 463 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH1-209ENST00000566510 PATL2C9JE40 543 aaKnown RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 POLR2DO15514 142 aaKnown RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 CCP110O43303 1012 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 TDO2P48775 406 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 TMX1Q9H3N1 280 aa16.36■□□□□ 0.21
CDH1-209ENST00000566510 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
CDH1-209ENST00000566510 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 GRIN1Q05586 938 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 MAP3K12Q12852 859 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 ZNF827Q17R98 1081 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 ARHGAP29Q52LW3 1261 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 VSTM4Q8IW00 320 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 DIS3L2Q8IYB7 885 aaKnown RBP16.35■□□□□ 0.21
CDH1-209ENST00000566510 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 NUP133Q8WUM0 1156 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 DDX60Q8IY21 1712 aaKnown RBP16.35■□□□□ 0.21
CDH1-209ENST00000566510 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 PRKAB2O43741 272 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 PUM3Q15397 648 aaKnown RBP16.35■□□□□ 0.21
CDH1-209ENST00000566510 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 MNS1Q8NEH6 495 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
CDH1-209ENST00000566510 CDHR2Q9BYE9 1310 aa16.35■□□□□ 0.21
CDH1-209ENST00000566510 BMP6P22004 513 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 KCNJ6P48051 423 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 TRMT44Q8IYL2 757 aaKnown RBP16.34■□□□□ 0.21
CDH1-209ENST00000566510 GRAMD1CQ8IYS0 662 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 LPIN2Q92539 896 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 WASF1Q92558 559 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 ZNF512BQ96KM6 892 aaPredicted RBP16.34■□□□□ 0.21
CDH1-209ENST00000566510 DCCP43146 1447 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 ERICH2A1L162 156 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 PDE8AO60658 829 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 FMNL1O95466 1100 aaPredicted RBP16.34■□□□□ 0.21
CDH1-209ENST00000566510 AKNAD1Q5T1N1 836 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 UBXN4Q92575 508 aa16.34■□□□□ 0.21
CDH1-209ENST00000566510 A0A0G2JS52 829 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 MMP1P03956 469 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 ARID4AP29374 1257 aaPredicted RBP16.33■□□□□ 0.21
CDH1-209ENST00000566510 LIFRP42702 1097 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 GABPB1Q06547 395 aaPredicted RBP16.33■□□□□ 0.21
CDH1-209ENST00000566510 NR5A1Q13285 461 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.21
CDH1-209ENST00000566510 POSTNQ15063 836 aa16.33■□□□□ 0.21
CDH1-209ENST00000566510 RTN1Q16799 776 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms