RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 CAVIN4Q5BKX8 364 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 SLC9C2Q5TAH2 1124 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 PI16Q6UXB8 463 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 FBXO33Q7Z6M2 555 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 DENND2AQ9ULE3 1009 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 ZBTB12Q9Y330 459 aaPredicted RBP19.89■□□□□ 0.77
RAB40C-210ENST00000566290 IRS2Q9Y4H2 1338 aa19.89■□□□□ 0.77
RAB40C-210ENST00000566290 MYO5AQ9Y4I1 1855 aaKnown RBP19.89■□□□□ 0.77
RAB40C-210ENST00000566290 GNAT2P19087 354 aa19.88■□□□□ 0.77
RAB40C-210ENST00000566290 IMMTQ16891 758 aaKnown RBP19.88■□□□□ 0.77
RAB40C-210ENST00000566290 DHX32Q7L7V1 743 aaKnown RBP19.88■□□□□ 0.77
RAB40C-210ENST00000566290 PGAP2Q9UHJ9 254 aa19.88■□□□□ 0.77
RAB40C-210ENST00000566290 CHGBP05060 677 aa19.87■□□□□ 0.77
RAB40C-210ENST00000566290 HIRAP54198 1017 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-210ENST00000566290 EVCP57679 992 aa19.87■□□□□ 0.77
RAB40C-210ENST00000566290 EXOSC10Q01780 885 aaKnown RBP19.87■□□□□ 0.77
RAB40C-210ENST00000566290 TOB2Q14106 344 aaPredicted RBP19.87■□□□□ 0.77
RAB40C-210ENST00000566290 DLK2Q6UY11 383 aa19.87■□□□□ 0.77
RAB40C-210ENST00000566290 PUS7LQ9H0K6 701 aaKnown RBP19.87■□□□□ 0.77
RAB40C-210ENST00000566290 LEMD3Q9Y2U8 911 aa19.87■□□□□ 0.77
RAB40C-210ENST00000566290 COL1A1P02452 1464 aaPredicted RBP19.86■□□□□ 0.77
RAB40C-210ENST00000566290 ZNF532Q9HCE3 1301 aa19.86■□□□□ 0.77
RAB40C-210ENST00000566290 ZDHHC9Q9Y397 364 aa19.86■□□□□ 0.77
RAB40C-210ENST00000566290 TAF6LQ9Y6J9 622 aa19.86■□□□□ 0.77
RAB40C-210ENST00000566290 IDH1O75874 414 aaKnown RBP19.85■□□□□ 0.77
RAB40C-210ENST00000566290 BAG4O95429 457 aaKnown RBP19.85■□□□□ 0.77
RAB40C-210ENST00000566290 BCAMP50895 628 aa19.85■□□□□ 0.77
RAB40C-210ENST00000566290 HUNKP57058 714 aa19.85■□□□□ 0.77
RAB40C-210ENST00000566290 TNIP1Q15025 636 aa19.85■□□□□ 0.77
RAB40C-210ENST00000566290 STOX1Q6ZVD7 989 aa19.85■□□□□ 0.77
RAB40C-210ENST00000566290 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
RAB40C-210ENST00000566290 SALL1Q9NSC2 1324 aa19.84■□□□□ 0.77
RAB40C-210ENST00000566290 FAM155AB1AL88 458 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-210ENST00000566290 E7EWF7 191 aa19.84■□□□□ 0.77
RAB40C-210ENST00000566290 FAM84BQ96KN1 310 aaPredicted RBP19.84■□□□□ 0.77
RAB40C-210ENST00000566290 STRBPQ96SI9 672 aaKnown RBP19.84■□□□□ 0.77
RAB40C-210ENST00000566290 RNF186Q9NXI6 227 aa19.84■□□□□ 0.77
RAB40C-210ENST00000566290 TPCN1Q9ULQ1 816 aa19.84■□□□□ 0.77
RAB40C-210ENST00000566290 TRPA1O75762 1119 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 FGAP02671 866 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 CPA1P15085 419 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 KIF23Q02241 960 aaPredicted RBP19.83■□□□□ 0.77
RAB40C-210ENST00000566290 ME3Q16798 604 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 CDC37L1Q7L3B6 337 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 RGS22Q8NE09 1264 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 LLPHQ9BRT6 129 aaKnown RBP19.83■□□□□ 0.77
RAB40C-210ENST00000566290 MTA3Q9BTC8 594 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 SAGE1Q9NXZ1 904 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 SMC3Q9UQE7 1217 aa19.83■□□□□ 0.77
RAB40C-210ENST00000566290 G3V3G9 751 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 VIL1P09327 827 aaKnown RBP19.82■□□□□ 0.76
RAB40C-210ENST00000566290 PDCP20941 246 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 ST3GAL1Q11201 340 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 DCAF8Q5TAQ9 597 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 USP48Q86UV5 1035 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 TRPM4Q8TD43 1214 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 GTF3C6Q969F1 213 aa19.82■□□□□ 0.76
RAB40C-210ENST00000566290 CNOT7Q9UIV1 285 aaKnown RBP19.82■□□□□ 0.76
RAB40C-210ENST00000566290 LARGE1O95461 756 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 EGFRP00533 1210 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 NT5C2P49902 561 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 GSE1Q14687 1217 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 SLFNL1Q499Z3 407 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 RGMBQ6NW40 437 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 CTU1Q7Z7A3 348 aaKnown RBP19.81■□□□□ 0.76
RAB40C-210ENST00000566290 MICALL2Q8IY33 904 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 ZC3H15Q8WU90 426 aaKnown RBP19.81■□□□□ 0.76
RAB40C-210ENST00000566290 ZNF274Q96GC6 653 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-210ENST00000566290 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
RAB40C-210ENST00000566290 ZNF646O15015 1829 aaPredicted RBP19.81■□□□□ 0.76
RAB40C-210ENST00000566290 PATL2C9JE40 543 aaKnown RBP19.8■□□□□ 0.76
RAB40C-210ENST00000566290 ZNF213O14771 459 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 PFKFB2O60825 505 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 SAMD7Q7Z3H4 446 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 PODNQ7Z5L7 613 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 MB21D2Q8IYB1 491 aaPredicted RBP19.8■□□□□ 0.76
RAB40C-210ENST00000566290 DPF2Q92785 391 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 ISY1Q9ULR0 285 aaKnown RBP19.8■□□□□ 0.76
RAB40C-210ENST00000566290 HPS5Q9UPZ3 1129 aa19.8■□□□□ 0.76
RAB40C-210ENST00000566290 PSME4Q14997 1843 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 HIBADHP31937 336 aaKnown RBP19.79■□□□□ 0.76
RAB40C-210ENST00000566290 PKP1Q13835 747 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 GIMAP6Q6P9H5 292 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 MAGEB6Q8N7X4 407 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 NCOA7Q8NI08 942 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 ATP6V1DQ9Y5K8 247 aa19.79■□□□□ 0.76
RAB40C-210ENST00000566290 TRAK2O60296 914 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 MCM5P33992 734 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 GYG1P46976 350 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 RSBN1LQ6PCB5 846 aaPredicted RBP19.78■□□□□ 0.76
RAB40C-210ENST00000566290 Q6ZUG5 572 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 NOL8Q76FK4 1167 aaKnown RBP19.78■□□□□ 0.76
RAB40C-210ENST00000566290 VPS37DQ86XT2 251 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 CCDC83Q8IWF9 413 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 TMEM87AQ8NBN3 555 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 GMLQ99445 158 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 NACAP1Q9BZK3 213 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 COA1Q9GZY4 146 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 LRP2BPQ9P2M1 347 aa19.78■□□□□ 0.76
RAB40C-210ENST00000566290 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms