RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 KCNJ4P48050 445 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 NOL9Q5SY16 702 aaKnown RBP11.76□□□□□ -0.53
SMPD3-206ENST00000566009 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 ANKRD2Q9GZV1 360 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 COG5Q9UP83 839 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 LRRC37A2A6NM11 1700 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 WDFY4Q6ZS81 3184 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 PLXNA1Q9UIW2 1896 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 AK9Q5TCS8 1911 aa11.76□□□□□ -0.53
SMPD3-206ENST00000566009 USP34Q70CQ2 3546 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 SNAP23O00161 211 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 ZKSCAN1P17029 563 aaPredicted RBP11.75□□□□□ -0.53
SMPD3-206ENST00000566009 TRMT44Q8IYL2 757 aaKnown RBP11.75□□□□□ -0.53
SMPD3-206ENST00000566009 ANKS1AQ92625 1134 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 TSPYL4Q9UJ04 414 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 DAGLAQ9Y4D2 1042 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 ZHX2Q9Y6X8 837 aa11.75□□□□□ -0.53
SMPD3-206ENST00000566009 PLXNB2O15031 1838 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 GFRA3O60609 400 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 RGS20O76081 388 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 ALADP13716 330 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 FPGSQ05932 587 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 SNX17Q15036 470 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 TTLL11Q8NHH1 800 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 LPAR1Q92633 364 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 GREM2Q9H772 168 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
SMPD3-206ENST00000566009 CTSWP56202 376 aa11.73□□□□□ -0.53
SMPD3-206ENST00000566009 CCL14Q16627 93 aa11.73□□□□□ -0.53
SMPD3-206ENST00000566009 MFSD14BQ5SR56 506 aa11.73□□□□□ -0.53
SMPD3-206ENST00000566009 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
SMPD3-206ENST00000566009 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
SMPD3-206ENST00000566009 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
SMPD3-206ENST00000566009 DDX20Q9UHI6 824 aaKnown RBP11.73□□□□□ -0.53
SMPD3-206ENST00000566009 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
SMPD3-206ENST00000566009 RLFQ13129 1914 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 REV3LO60673 3130 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 RAG1P15918 1043 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 IGHMBP2P38935 993 aaKnown RBP11.72□□□□□ -0.53
SMPD3-206ENST00000566009 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-206ENST00000566009 GJC2Q5T442 439 aaPredicted RBP11.72□□□□□ -0.53
SMPD3-206ENST00000566009 ZNF804AQ7Z570 1209 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 GJD3Q8N144 294 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 SOCS4Q8WXH5 440 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMPD3-206ENST00000566009 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 SPEF2Q9C093 1822 aa11.72□□□□□ -0.53
SMPD3-206ENST00000566009 KIAA0355O15063 1070 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 TLE2Q04725 743 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 FKBP1CQ5VVH2 108 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 CCDC191Q8NCU4 936 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 HLA-CQ95604 372 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 SLC28A3Q9HAS3 691 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 TMOD2Q9NZR1 351 aa11.71□□□□□ -0.53
SMPD3-206ENST00000566009 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.54
SMPD3-206ENST00000566009 MSCO60682 206 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 CLTBP09497 229 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 PTPRAP18433 802 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 CHRNDQ07001 517 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 RAB30Q15771 203 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 TREML2Q5T2D2 321 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 USP6NLQ92738 828 aa11.7□□□□□ -0.54
SMPD3-206ENST00000566009 BAHCC1Q9P281 2608 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 ZNF318Q5VUA4 2279 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 TAF5LO75529 589 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 CNGA1P29973 690 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 PTPN5P54829 565 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 RASIP1Q5U651 963 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 ARRDC4Q8NCT1 418 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 MYD88Q99836 296 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 MTCH2Q9Y6C9 303 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 PKD1L2Q7Z442 2459 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 SPTBN4Q9H254 2564 aa11.69□□□□□ -0.54
SMPD3-206ENST00000566009 MYBBP1AQ9BQG0 1328 aaKnown RBP11.68□□□□□ -0.54
SMPD3-206ENST00000566009 CHD9Q3L8U1 2897 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 POU3F3P20264 500 aaPredicted RBP11.68□□□□□ -0.54
SMPD3-206ENST00000566009 RGS2P41220 211 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 GRIK5Q16478 980 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 TMEM240Q5SV17 173 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 HFE2Q6ZVN8 426 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 SCYL3Q8IZE3 742 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 FAM151AQ8WW52 585 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 MFSD14AQ96MC6 490 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 MPHOSPH8Q99549 860 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
SMPD3-206ENST00000566009 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
SMPD3-206ENST00000566009 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
SMPD3-206ENST00000566009 POTEB3A0JP26 581 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 TRIM75PA6NK02 468 aa11.67□□□□□ -0.54
SMPD3-206ENST00000566009 KBTBD13C9JR72 458 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms