RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
LINC00561-201ENST00000565815 DENND4BO75064 1496 aaPredicted RBP6.33□□□□□ -1.4
LINC00561-201ENST00000565815 ZMYM4Q5VZL5 1548 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 MAOBP27338 520 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 USP26Q9BXU7 913 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 PPM1HQ9ULR3 514 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 CSADQ9Y600 493 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 RIMS1Q86UR5 1692 aaKnown RBP6.33□□□□□ -1.4
LINC00561-201ENST00000565815 INPP5AQ14642 412 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 AGMOQ6ZNB7 445 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 KCNB2Q92953 911 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 PPP4R2Q9NY27 417 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 TTC37Q6PGP7 1564 aa6.33□□□□□ -1.4
LINC00561-201ENST00000565815 PREX1Q8TCU6 1659 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 CTTNBP2Q8WZ74 1663 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 GRIK4Q16099 956 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 TREML4Q6UXN2 200 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 AGGF1Q8N302 714 aaeCLIP6.32□□□□□ -1.4
LINC00561-201ENST00000565815 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
LINC00561-201ENST00000565815 TTBK1Q5TCY1 1321 aaPredicted RBP6.32□□□□□ -1.4
LINC00561-201ENST00000565815 PCSK7Q16549 785 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 MCF2L2Q86YR7 1114 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 WFDC8Q8IUA0 241 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
LINC00561-201ENST00000565815 XRCC5P13010 732 aaKnown RBP6.31□□□□□ -1.4
LINC00561-201ENST00000565815 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 ILDR2Q71H61 639 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 NEDD1Q8NHV4 660 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 GPBAR1Q8TDU6 330 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 GINM1Q9NU53 330 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 CORINQ9Y5Q5 1042 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 LIG1P18858 919 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 BCL11AQ9H165 835 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 EFR3BQ9Y2G0 817 aa6.31□□□□□ -1.4
LINC00561-201ENST00000565815 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 LOC100289279A0A1B0GTE1 492 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 ZNF862O60290 1169 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 GJA8P48165 433 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 SEZ6Q53EL9 994 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 SNAP47Q5SQN1 464 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 ANTXR1Q9H6X2 564 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 ZFYVE16Q7Z3T8 1539 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 FRMPD1Q5SYB0 1578 aa6.3□□□□□ -1.4
LINC00561-201ENST00000565815 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
LINC00561-201ENST00000565815 FAM221AA4D161 298 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 ALX3O95076 343 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 GSTP1P09211 210 aaKnown RBP6.29□□□□□ -1.4
LINC00561-201ENST00000565815 DRD2P14416 443 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
LINC00561-201ENST00000565815 LINC00114Q6XXX2 140 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 PLVAPQ9BX97 442 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 ATP10BO94823 1461 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 DCDC2CA8MYV0 355 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 DNAJA2O60884 412 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 ARHGEF15O94989 841 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 FGRP09769 529 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 NME2P22392 152 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 NASPP49321 788 aaPredicted RBP6.29□□□□□ -1.4
LINC00561-201ENST00000565815 C19orf57Q0VDD7 668 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 FAM169BQ8N8A8 192 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 UHRF1BP1Q6BDS2 1440 aa6.29□□□□□ -1.4
LINC00561-201ENST00000565815 A0A0A0MRY4 1105 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 ATF4P18848 351 aaPredicted RBP6.28□□□□□ -1.4
LINC00561-201ENST00000565815 CABP4P57796 275 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 UBE3DQ7Z6J8 389 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 C8orf37Q96NL8 207 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 ARHGEF12Q9NZN5 1544 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 RICTORQ6R327 1708 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 GREM1O60565 184 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 APOBRQ0VD83 1088 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 SREK1Q8WXA9 508 aaKnown RBP6.28□□□□□ -1.4
LINC00561-201ENST00000565815 PLPPR2Q96GM1 343 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 CEP44Q9C0F1 390 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 POLR3KQ9Y2Y1 108 aaPredicted RBP6.28□□□□□ -1.4
LINC00561-201ENST00000565815 FER1L4A9Z1Z3 1794 aa6.28□□□□□ -1.4
LINC00561-201ENST00000565815 FAM86C2PA6NEL3 165 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 COL8A1P27658 744 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 GK5Q6ZS86 529 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 FAM196AQ6ZSG2 479 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 C12orf40Q86WS4 652 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 MIR1-1HGQ9H1L0 117 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 C9orf84Q5VXU9 1444 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 ARNTP27540 789 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 LRFN4Q6PJG9 635 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 TTC9Q92623 222 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 ACSBG1Q96GR2 724 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 BRMS1Q9HCU9 246 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 ATP10AO60312 1499 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms