RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 RCAN3Q9UKA8 241 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 HPS5Q9UPZ3 1129 aa13.45□□□□□ -0.26
NSMCE1-210ENST00000565626 ENTPD3O75355 529 aa13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 CYP2E1P05181 493 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 SOX10P56693 466 aa13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 PPIL2Q13356 520 aa13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
NSMCE1-210ENST00000565626 BRCA2P51587 3418 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 PHF20L1A8MW92 1017 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 ZAP70P43403 619 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 TAF1CQ15572 869 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 SIRT2Q8IXJ6 389 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 CD99L2Q8TCZ2 262 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 PIH1D3Q9NQM4 214 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 TRIM17Q9Y577 477 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 AK9Q5TCS8 1911 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 LAMB1P07942 1786 aa13.43□□□□□ -0.26
NSMCE1-210ENST00000565626 FAM196BA6NMK8 535 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 APBB1O00213 710 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 LDHCP07864 332 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 CETPP11597 493 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 RGS19P49795 217 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 GSTO1P78417 241 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 PPATQ06203 517 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 OTOP1Q7RTM1 612 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 ADGRA1Q86SQ6 560 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 SH3RF3Q8TEJ3 882 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 BCL11AQ9H165 835 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 IL1RAPL2Q9NP60 686 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 ZBTB40Q9NUA8 1239 aa13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-210ENST00000565626 MS4A1P11836 297 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 SP3Q02447 781 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 MOGSQ13724 837 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 NOL9Q5SY16 702 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 NAA16Q6N069 864 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 FBXO46Q6PJ61 603 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 CCDC84Q86UT8 332 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 AACSQ86V21 672 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 TEX11Q8IYF3 940 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 ZNF512BQ96KM6 892 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 ZFYVE28Q9HCC9 887 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 AATFQ9NY61 560 aaKnown RBP eCLIP13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 DDX19BQ9UMR2 479 aa13.41□□□□□ -0.26
NSMCE1-210ENST00000565626 MKI67P46013 3256 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 MAP3K10Q02779 954 aa13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 ERO1AQ96HE7 468 aa13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 ANTXR1Q9H6X2 564 aa13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 KCNH4Q9UQ05 1017 aa13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 ZHX2Q9Y6X8 837 aa13.4□□□□□ -0.26
NSMCE1-210ENST00000565626 TNRC18O15417 2968 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 PTPRAP18433 802 aa13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 MLLT1Q03111 559 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 RRP1BQ14684 758 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 ERC1Q8IUD2 1116 aa13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 SCYL3Q8IZE3 742 aa13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 PICK1Q9NRD5 415 aa13.39□□□□□ -0.27
NSMCE1-210ENST00000565626 PDHXO00330 501 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 NPM3O75607 178 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 MAPKAPK5Q8IW41 473 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 TGFBRAP1Q8WUH2 860 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 ARHGAP39Q9C0H5 1083 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 EFCC1Q9HA90 598 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 CPA4Q9UI42 421 aa13.38□□□□□ -0.27
NSMCE1-210ENST00000565626 DOCK2Q92608 1830 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 TLR2O60603 784 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 BAG3O95817 575 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 CYP7A1P22680 504 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 PPP4CP60510 307 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 GPAT2Q6NUI2 795 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 ANKRD23Q86SG2 305 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 MIGA1Q8NAN2 632 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 AFG3L2Q9Y4W6 797 aa13.37□□□□□ -0.27
NSMCE1-210ENST00000565626 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 TRIM75PA6NK02 468 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 CXCL11O14625 94 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 TBC1D12O60347 775 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 HMMRO75330 724 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 CYP2C8P10632 490 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 HSP90AB4PQ58FF6 505 aa13.36□□□□□ -0.27
NSMCE1-210ENST00000565626 MAGEB6Q8N7X4 407 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms