RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 HHIPL1Q96JK4 782 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 RIOK1Q9BRS2 568 aaKnown RBP22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 NACAP1Q9BZK3 213 aa22.71■■□□□ 1.23
CSPG4P13-201ENST00000565545 SHTN1A0MZ66 631 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 USP17L3A6NCW0 530 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 USP17L4A6NCW7 530 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 FOXP2O15409 715 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 BAG3O95817 575 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 FGAP02671 866 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 PPP4CP60510 307 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 IMMTQ16891 758 aaKnown RBP22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 USP17L1Q7RTZ2 530 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 ZBTB12Q9Y330 459 aaPredicted RBP22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 SLC4A4Q9Y6R1 1079 aa22.7■■□□□ 1.22
CSPG4P13-201ENST00000565545 APPP05067 770 aa22.69■■□□□ 1.22
CSPG4P13-201ENST00000565545 CYP21A2P08686 494 aa22.69■■□□□ 1.22
CSPG4P13-201ENST00000565545 MCM2P49736 904 aa22.69■■□□□ 1.22
CSPG4P13-201ENST00000565545 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
CSPG4P13-201ENST00000565545 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
CSPG4P13-201ENST00000565545 MROH7-TTC4A0A0A0MT08 1334 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 GSG1L2A8MUP6 293 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 NEK4P51957 841 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 GRIK5Q16478 980 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 IFNL3Q8IZI9 196 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 MRIQ9BWK5 157 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 TBC1D2Q9BYX2 928 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 CRNKL1Q9BZJ0 848 aaKnown RBP22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 ZSWIM6Q9HCJ5 1215 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 SCN9AQ15858 1988 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 ZNF646O15015 1829 aaPredicted RBP22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 LAMA4Q16363 1823 aa22.68■■□□□ 1.22
CSPG4P13-201ENST00000565545 PLCG2P16885 1265 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 HUNKP57058 714 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 DACT2Q5SW24 774 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 SAMD7Q7Z3H4 446 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 DPF2Q92785 391 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 JAKMIP1Q96N16 626 aaKnown RBP22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 NAPBQ9H115 298 aa22.67■■□□□ 1.22
CSPG4P13-201ENST00000565545 TRPM7Q96QT4 1865 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 GAKO14976 1311 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 GPR75-ASB3A0A0A6YYF3 556 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 PSMD14O00487 310 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 ZNF213O14771 459 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 HMGB1P09429 215 aaKnown RBP22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 MLLT1Q03111 559 aaPredicted RBP22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 NOGQ13253 232 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 TBC1D10BQ4KMP7 808 aaPredicted RBP22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 CERS5Q8N5B7 392 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 AATFQ9NY61 560 aaKnown RBP eCLIP22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 CYP46A1Q9Y6A2 500 aa22.66■■□□□ 1.22
CSPG4P13-201ENST00000565545 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 CASTP20810 708 aaKnown RBP22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 DYNLL1P63167 89 aaKnown RBP22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 HDLBPQ00341 1268 aaKnown RBP22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 DLK2Q6UY11 383 aa22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 ATP8A2Q9NTI2 1148 aa22.65■■□□□ 1.22
CSPG4P13-201ENST00000565545 THSD7BQ9C0I4 1608 aa22.64■■□□□ 1.22
CSPG4P13-201ENST00000565545 DIXDC1Q155Q3 683 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 ADCK5Q3MIX3 580 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 BLOC1S2Q6QNY1 142 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 HHIPL2Q6UWX4 724 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 RUFY3Q7L099 469 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 KRT26Q7Z3Y9 468 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 DCPSQ96C86 337 aaKnown RBP22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 NEK1Q96PY6 1258 aa22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 TTF2Q9UNY4 1162 aaKnown RBP22.64■■□□□ 1.21
CSPG4P13-201ENST00000565545 PRKAB2O43741 272 aa22.63■■□□□ 1.21
CSPG4P13-201ENST00000565545 TDO2P48775 406 aa22.63■■□□□ 1.21
CSPG4P13-201ENST00000565545 MCOLN1Q9GZU1 580 aa22.63■■□□□ 1.21
CSPG4P13-201ENST00000565545 ALDH8A1Q9H2A2 487 aaPredicted RBP22.63■■□□□ 1.21
CSPG4P13-201ENST00000565545 KCNQ5Q9NR82 932 aa22.63■■□□□ 1.21
CSPG4P13-201ENST00000565545 E7EWF7 191 aa22.62■■□□□ 1.21
CSPG4P13-201ENST00000565545 K7ELQ4 463 aaPredicted RBP22.62■■□□□ 1.21
CSPG4P13-201ENST00000565545 RPS12P25398 132 aaKnown RBP22.62■■□□□ 1.21
CSPG4P13-201ENST00000565545 C2orf69Q8N8R5 385 aa22.62■■□□□ 1.21
CSPG4P13-201ENST00000565545 UPF3BQ9BZI7 483 aaKnown RBP22.62■■□□□ 1.21
CSPG4P13-201ENST00000565545 BTDP43251 543 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 DGKZQ13574 1117 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 TEKT1Q969V4 418 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 TTC14Q96N46 770 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 ZIC5Q96T25 663 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 GBA2Q9HCG7 927 aaPredicted RBP22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 DAGLAQ9Y4D2 1042 aa22.61■■□□□ 1.21
CSPG4P13-201ENST00000565545 VIL1P09327 827 aaKnown RBP22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 RPS6KB1P23443 525 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 RGMBQ6NW40 437 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 SDR42E1Q8WUS8 393 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 PDRG1Q9NUG6 133 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 ANAPC4Q9UJX5 808 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 TAF6LQ9Y6J9 622 aa22.6■■□□□ 1.21
CSPG4P13-201ENST00000565545 ADM5C9JUS6 153 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 CD2BP2O95400 341 aaKnown RBP22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 EGFRP00533 1210 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 RGS19P49795 217 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 ANKRD1Q15327 319 aa22.59■■□□□ 1.21
CSPG4P13-201ENST00000565545 RSBN1LQ6PCB5 846 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms