RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 TMPRSS2O15393 492 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 NDUFB5O43674 189 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 CEACAM5P06731 702 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 ZNF865P0CJ78 1059 aaPredicted RBP7.7□□□□□ -1.18
CHD9-215ENST00000565442 ANGEL2Q5VTE6 544 aaKnown RBP7.7□□□□□ -1.18
CHD9-215ENST00000565442 ZSWIM9Q86XI8 627 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 TOX2Q96NM4 488 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 PIDD1Q9HB75 910 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 FAM53CQ9NYF3 392 aa7.7□□□□□ -1.18
CHD9-215ENST00000565442 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 RAP1GAPP47736 663 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 SLC23A3Q6PIS1 610 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 ARHGAP27Q6ZUM4 889 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 GALNT12Q8IXK2 581 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 GJD3Q8N144 294 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 TMC1Q8TDI8 760 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 ZNF576Q9H609 170 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 CRIM1Q9NZV1 1036 aa7.69□□□□□ -1.18
CHD9-215ENST00000565442 TMEM265A0A087WTH1 108 aa7.68□□□□□ -1.18
CHD9-215ENST00000565442 AP3B2Q13367 1082 aa7.68□□□□□ -1.18
CHD9-215ENST00000565442 MLANAQ16655 118 aa7.68□□□□□ -1.18
CHD9-215ENST00000565442 LCE5AQ5TCM9 118 aa7.68□□□□□ -1.18
CHD9-215ENST00000565442 ATXN3LQ9H3M9 355 aa7.68□□□□□ -1.18
CHD9-215ENST00000565442 ZNF503-AS2A6NEH8 195 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 CFPP27918 469 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 OXCT1P55809 520 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 KCNMB1Q16558 191 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 TMC7Q7Z402 723 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 ZSCAN29Q8IWY8 852 aaPredicted RBP7.67□□□□□ -1.18
CHD9-215ENST00000565442 SMYD4Q8IYR2 804 aaPredicted RBP7.67□□□□□ -1.18
CHD9-215ENST00000565442 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 FANCD2OSQ96PS1 177 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 PLAGL2Q9UPG8 496 aa7.67□□□□□ -1.18
CHD9-215ENST00000565442 LEFTY1O75610 366 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 TSPAN15O95858 294 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 LIG1P18858 919 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 ITPKAP23677 461 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 ID3Q02535 119 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 LILRA6Q6PI73 481 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 C1QL4Q86Z23 238 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 ZSCAN18Q8TBC5 510 aaPredicted RBP7.66□□□□□ -1.18
CHD9-215ENST00000565442 PPP1R16BQ96T49 567 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 RBCK1Q9BYM8 510 aa7.66□□□□□ -1.18
CHD9-215ENST00000565442 WDR89Q96FK6 387 aaPredicted RBP7.65□□□□□ -1.18
CHD9-215ENST00000565442 DUSP23Q9BVJ7 150 aa7.65□□□□□ -1.18
CHD9-215ENST00000565442 CCDC86Q9H6F5 360 aaKnown RBP7.65□□□□□ -1.18
CHD9-215ENST00000565442 PRDM7Q9NQW5 492 aa7.65□□□□□ -1.18
CHD9-215ENST00000565442 SLFN14P0C7P3 912 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 ERCC3P19447 782 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 KIAA0319Q5VV43 1072 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 LCNL1Q6ZST4 164 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 NPAS4Q8IUM7 802 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 LRRC56Q8IYG6 542 aaPredicted RBP7.64□□□□□ -1.19
CHD9-215ENST00000565442 ZNF428Q96B54 188 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 DISC1Q9NRI5 854 aa7.64□□□□□ -1.19
CHD9-215ENST00000565442 NCANO14594 1321 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 ITIH2P19823 946 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 TTLL4Q14679 1199 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
CHD9-215ENST00000565442 CITED4Q96RK1 184 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 TNKS2Q9H2K2 1166 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 PCDHGC5Q9Y5F6 944 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 SNX11Q9Y5W9 270 aa7.63□□□□□ -1.19
CHD9-215ENST00000565442 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.62□□□□□ -1.19
CHD9-215ENST00000565442 PRRG2O14669 202 aa7.62□□□□□ -1.19
CHD9-215ENST00000565442 RNGTTO60942 597 aaKnown RBP7.62□□□□□ -1.19
CHD9-215ENST00000565442 HCLS1P14317 486 aaPredicted RBP7.62□□□□□ -1.19
CHD9-215ENST00000565442 SIAH1Q8IUQ4 282 aa7.62□□□□□ -1.19
CHD9-215ENST00000565442 LIN37Q96GY3 246 aaPredicted RBP7.62□□□□□ -1.19
CHD9-215ENST00000565442 EHD4Q9H223 541 aa7.62□□□□□ -1.19
CHD9-215ENST00000565442 PCOLCE2Q9UKZ9 415 aa7.62□□□□□ -1.19
CHD9-215ENST00000565442 GPR182O15218 404 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 ZNF862O60290 1169 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 RBM25P49756 843 aaKnown RBP7.61□□□□□ -1.19
CHD9-215ENST00000565442 PTPN12Q05209 780 aaKnown RBP7.61□□□□□ -1.19
CHD9-215ENST00000565442 PDE3BQ13370 1112 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 KIF4BQ2VIQ3 1234 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 USPL1Q5W0Q7 1092 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 BCL2L13Q9BXK5 485 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 ZC3H12CQ9C0D7 883 aaKnown RBP7.61□□□□□ -1.19
CHD9-215ENST00000565442 NIF3L1Q9GZT8 377 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 CTNND2Q9UQB3 1225 aa7.61□□□□□ -1.19
CHD9-215ENST00000565442 TREHO43280 583 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 ZSCAN22P10073 491 aaPredicted RBP7.6□□□□□ -1.19
CHD9-215ENST00000565442 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.19
CHD9-215ENST00000565442 ZP2Q05996 745 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 IKZF1Q13422 519 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 SYDE1Q6ZW31 735 aaPredicted RBP7.6□□□□□ -1.19
CHD9-215ENST00000565442 ANKLE2Q86XL3 938 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 TOP6BLQ8N6T0 577 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 ASB11Q8WXH4 323 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 DMRTB1Q96MA1 342 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 LMCD1Q9NZU5 365 aa7.6□□□□□ -1.19
CHD9-215ENST00000565442 B8ZZF3 427 aa7.59□□□□□ -1.19
CHD9-215ENST00000565442 IGHA2P01877 340 aa7.59□□□□□ -1.19
CHD9-215ENST00000565442 PLCB3Q01970 1234 aa7.59□□□□□ -1.19
CHD9-215ENST00000565442 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
CHD9-215ENST00000565442 KRT82Q9NSB4 513 aa7.59□□□□□ -1.19
CHD9-215ENST00000565442 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms