RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ATP8B1O43520 1251 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 RAB3GAP1Q15042 981 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 POTEBQ6S5H4 581 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 TRIM58Q8NG06 486 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 HAUS1Q96CS2 278 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 CDK19Q9BWU1 502 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 TEX13AQ9BXU3 409 aaPredicted RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 NOC2LQ9Y3T9 749 aaKnown RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 GOLGA8CPA6NN73 597 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 KIF1CO43896 1103 aaKnown RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 SYF2O95926 243 aaKnown RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 BCRP11274 1271 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 PLCD1P51178 756 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 MCM10Q7L590 875 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 RPGRQ92834 1020 aaKnown RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 POLE3Q9NRF9 147 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 OAS2P29728 719 aaKnown RBP5.65□□□□□ -1.5
SMG1-211ENST00000565324 GJC1P36383 396 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 USP6NLQ92738 828 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 EFHD1Q9BUP0 239 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 SPZ1Q9BXG8 430 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 PANK2Q9BZ23 570 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 CHMP2AO43633 222 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 RAP1GDS1P52306 607 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 KRT79Q5XKE5 535 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 RIC8AQ9NPQ8 531 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 SCINQ9Y6U3 715 aa5.65□□□□□ -1.5
SMG1-211ENST00000565324 HOXA7P31268 230 aaPredicted RBP5.65□□□□□ -1.51
SMG1-211ENST00000565324 KLHDC4Q8TBB5 520 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 NSMCE1Q8WV22 266 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.51
SMG1-211ENST00000565324 STK38LQ9Y2H1 464 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 E9PMD0 336 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 RIOK3O14730 519 aaKnown RBP5.65□□□□□ -1.51
SMG1-211ENST00000565324 PFDN6O15212 129 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 ATP6V1E1P36543 226 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 TBC1D8BQ0IIM8 1120 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 PLCB4Q15147 1175 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 SCOCQ9UIL1 159 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.65□□□□□ -1.51
SMG1-211ENST00000565324 KLF18A0A0U1RQI7 1052 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 SECISBP2LQ93073 1101 aaKnown RBP5.65□□□□□ -1.51
SMG1-211ENST00000565324 SERPINI1Q99574 410 aa5.65□□□□□ -1.51
SMG1-211ENST00000565324 TRIM37O94972 964 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SKIP12755 728 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 CCDC51Q96ER9 411 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 AFG3L2Q9Y4W6 797 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 CAPN7Q9Y6W3 813 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 HSPA8P11142 646 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 ASIC2Q16515 512 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 GFM2Q969S9 779 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 SPDL1Q96EA4 605 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TMOD3Q9NYL9 352 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 ANKFY1Q9P2R3 1169 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SUN1O94901 812 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 DNM1Q05193 864 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 MCMDC2Q4G0Z9 681 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 NOC4LQ9BVI4 516 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 STX8Q9UNK0 236 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 EFCAB8A8MWE9 144 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 CALUO43852 315 aaPredicted RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 CTAGE3PQ8IX95 158 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 MLKLQ8NB16 471 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TEKT1Q969V4 418 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 PAWRQ96IZ0 340 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 ASXL1Q8IXJ9 1541 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TBC1D8O95759 1140 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TAF12Q16514 161 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TRIM42Q8IWZ5 723 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TTC16Q8NEE8 873 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 GIMAP4Q9NUV9 329 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TMEM132EQ6IEE7 984 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TTC4O95801 387 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 IGSF22Q8N9C0 903 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 ESYT1Q9BSJ8 1104 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TUBB6Q9BUF5 446 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SPINK5Q9NQ38 1064 aaPredicted RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 DAAM1Q9Y4D1 1078 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 KRT5P13647 590 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 LMNB1P20700 586 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 RPS6KA1Q15418 735 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 CCDC105Q8IYK2 499 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 ZNF710Q8N1W2 664 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 TXLNGQ9NUQ3 528 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SAR1BQ9Y6B6 198 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SERPINB6P35237 376 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 PEX26Q7Z412 305 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 CFTRP13569 1480 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 DAPK3O43293 454 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 NAPAP54920 295 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SLC12A2P55011 1212 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 SV2BQ7L1I2 683 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 LRRC43Q8N309 656 aa5.64□□□□□ -1.51
SMG1-211ENST00000565324 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
SMG1-211ENST00000565324 TSPY3P0CV98 308 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 TSPY8P0CW00 308 aa5.63□□□□□ -1.51
SMG1-211ENST00000565324 U2AF2P26368 475 aaKnown RBP eCLIP5.63□□□□□ -1.514e-7■■■■□ 19.5
SMG1-211ENST00000565324 MAN1A1P33908 653 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms