RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 BACH2Q9BYV9 841 aa7.23□□□□□ -1.25
PALB2-203ENST00000565038 GSX1Q9H4S2 264 aaPredicted RBP7.23□□□□□ -1.25
PALB2-203ENST00000565038 UNCXA6NJT0 531 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 HCLS1P14317 486 aaPredicted RBP7.22□□□□□ -1.25
PALB2-203ENST00000565038 CDK8P49336 464 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 RPS26P62854 115 aaKnown RBP7.22□□□□□ -1.25
PALB2-203ENST00000565038 INPP5AQ14642 412 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 C12orf40Q86WS4 652 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 PHC3Q8NDX5 983 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 YIPF2Q9BWQ6 316 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 ATXN3LQ9H3M9 355 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 SEMA6CQ9H3T2 930 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 ACSS3Q9H6R3 686 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 PIDD1Q9HB75 910 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 DAGLAQ9Y4D2 1042 aa7.22□□□□□ -1.25
PALB2-203ENST00000565038 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 MINDY4BA8MYZ0 360 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 RNGTTO60942 597 aaKnown RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 RLBP1P12271 317 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 LRFN4Q6PJG9 635 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 EZH1Q92800 747 aaPredicted RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 JARID2Q92833 1246 aaPredicted RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 ELMO3Q96BJ8 720 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 MRRFQ96E11 262 aaKnown RBP7.21□□□□□ -1.26
PALB2-203ENST00000565038 MIR1-1HGQ9H1L0 117 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 PICK1Q9NRD5 415 aa7.21□□□□□ -1.26
PALB2-203ENST00000565038 DYNC1LI2O43237 492 aaPredicted RBP7.2□□□□□ -1.26
PALB2-203ENST00000565038 PF4P02776 101 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 NEFMP07197 916 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 ERVK-24P63145 666 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 PPM1JQ5JR12 505 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 RNF43Q68DV7 783 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 SCARA3Q6AZY7 606 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 PAOXQ6QHF9 649 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 ZNF428Q96B54 188 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 PLPPR2Q96GM1 343 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 MFSD14AQ96MC6 490 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 TMEM74Q96NL1 305 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 KBTBD4Q9NVX7 518 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 GGT7Q9UJ14 662 aa7.2□□□□□ -1.26
PALB2-203ENST00000565038 RECKO95980 971 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 IGLV1-40P01703 118 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 NFIAQ12857 509 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 CAMK2GQ13555 558 aaPredicted RBP7.19□□□□□ -1.26
PALB2-203ENST00000565038 MAP7Q14244 749 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 SMYD4Q8IYR2 804 aaPredicted RBP7.19□□□□□ -1.26
PALB2-203ENST00000565038 SHISA5Q8N114 240 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 FBXL6Q8N531 539 aa7.19□□□□□ -1.26
PALB2-203ENST00000565038 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
PALB2-203ENST00000565038 PRAMEF27A3QJZ7 478 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 ADMP35318 185 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 FAM160A1Q05DH4 1040 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 WIPI1Q5MNZ9 446 aaPredicted RBP7.18□□□□□ -1.26
PALB2-203ENST00000565038 BNC2Q6ZN30 1099 aaPredicted RBP7.18□□□□□ -1.26
PALB2-203ENST00000565038 ERMP1Q7Z2K6 904 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 RNF214Q8ND24 703 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 ISL2Q96A47 359 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
PALB2-203ENST00000565038 PRKAG2Q9UGJ0 569 aa7.18□□□□□ -1.26
PALB2-203ENST00000565038 LMNB2Q03252 620 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 HS2ST1Q7LGA3 356 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 HDXQ7Z353 690 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 RHOVQ96L33 236 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 TBC1D32Q96NH3 1257 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 DBNDD2Q9BQY9 259 aa7.17□□□□□ -1.26
PALB2-203ENST00000565038 WDR64B1ANS9 1081 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 GSC2O15499 205 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 ZNF76P36508 570 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 FANCCQ00597 558 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 RING1Q06587 406 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 PWP1Q13610 501 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 ZBTB37Q5TC79 503 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 SEZ6L2Q6UXD5 910 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 CYFIP1Q7L576 1253 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 UBE3DQ7Z6J8 389 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
PALB2-203ENST00000565038 SHKBP1Q8TBC3 707 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 C1GALT1Q9NS00 363 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 SNCAIPQ9Y6H5 919 aa7.16□□□□□ -1.26
PALB2-203ENST00000565038 F13A1P00488 732 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 F13BP05160 661 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 VAMP1P23763 118 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 NTF4P34130 210 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 CDK5R2Q13319 367 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 SNAP47Q5SQN1 464 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 GOLM1Q8NBJ4 401 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 PCOLCE2Q9UKZ9 415 aa7.15□□□□□ -1.26
PALB2-203ENST00000565038 FAM170BA6NMN3 283 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 GFRA2O00451 464 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 FANCGO15287 622 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 RBM25P49756 843 aaKnown RBP7.14□□□□□ -1.27
PALB2-203ENST00000565038 ETF1P62495 437 aaKnown RBP7.14□□□□□ -1.27
PALB2-203ENST00000565038 RPL6Q02878 288 aaKnown RBP7.14□□□□□ -1.27
PALB2-203ENST00000565038 CDC37L1Q7L3B6 337 aa7.14□□□□□ -1.27
PALB2-203ENST00000565038 ZAR1Q86SH2 424 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms