RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
CMTM3-209ENST00000565003 FBXO46Q6PJ61 603 aaPredicted RBP12.34□□□□□ -0.43
CMTM3-209ENST00000565003 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 CD99L2Q8TCZ2 262 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 TLR7Q9NYK1 1049 aaKnown RBP12.34□□□□□ -0.43
CMTM3-209ENST00000565003 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
CMTM3-209ENST00000565003 BTBD19C9JJ37 291 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 CETPP11597 493 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 MLLT1Q03111 559 aaPredicted RBP12.33□□□□□ -0.44
CMTM3-209ENST00000565003 PPATQ06203 517 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 TAF1CQ15572 869 aaPredicted RBP12.33□□□□□ -0.44
CMTM3-209ENST00000565003 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
CMTM3-209ENST00000565003 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.33□□□□□ -0.44
CMTM3-209ENST00000565003 DBNLQ9UJU6 430 aaKnown RBP12.33□□□□□ -0.44
CMTM3-209ENST00000565003 TRIM17Q9Y577 477 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 MAST2Q6P0Q8 1798 aa12.33□□□□□ -0.44
CMTM3-209ENST00000565003 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 GSTO1P78417 241 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 SP3Q02447 781 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 EAF2Q96CJ1 260 aaPredicted RBP12.32□□□□□ -0.44
CMTM3-209ENST00000565003 ERO1AQ96HE7 468 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 ZNF512BQ96KM6 892 aaPredicted RBP12.32□□□□□ -0.44
CMTM3-209ENST00000565003 ZFYVE28Q9HCC9 887 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 LRP2BPQ9P2M1 347 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 KCNH4Q9UQ05 1017 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 EXOC6BQ9Y2D4 811 aa12.32□□□□□ -0.44
CMTM3-209ENST00000565003 CYP2E1P05181 493 aaPredicted RBP12.31□□□□□ -0.44
CMTM3-209ENST00000565003 LDHCP07864 332 aa12.31□□□□□ -0.44
CMTM3-209ENST00000565003 MAP3K10Q02779 954 aa12.31□□□□□ -0.44
CMTM3-209ENST00000565003 MOGSQ13724 837 aa12.31□□□□□ -0.44
CMTM3-209ENST00000565003 ADGRA1Q86SQ6 560 aa12.31□□□□□ -0.44
CMTM3-209ENST00000565003 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CMTM3-209ENST00000565003 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
CMTM3-209ENST00000565003 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
CMTM3-209ENST00000565003 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
CMTM3-209ENST00000565003 TLR2O60603 784 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
CMTM3-209ENST00000565003 ZAP70P43403 619 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 NAA16Q6N069 864 aaPredicted RBP12.3□□□□□ -0.44
CMTM3-209ENST00000565003 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 SH3RF3Q8TEJ3 882 aaPredicted RBP12.3□□□□□ -0.44
CMTM3-209ENST00000565003 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 PIH1D3Q9NQM4 214 aaKnown RBP12.3□□□□□ -0.44
CMTM3-209ENST00000565003 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 ZSWIM8A7E2V4 1837 aa12.3□□□□□ -0.44
CMTM3-209ENST00000565003 DOCK1Q14185 1865 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 COL2A1P02458 1487 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-209ENST00000565003 FAM196BA6NMK8 535 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 MAP4K4O95819 1239 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-209ENST00000565003 MS4A1P11836 297 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 PTPRAP18433 802 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 TEX11Q8IYF3 940 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 OSBPL5Q9H0X9 879 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-209ENST00000565003 PICK1Q9NRD5 415 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 AATFQ9NY61 560 aaKnown RBP eCLIP12.29□□□□□ -0.44
CMTM3-209ENST00000565003 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-209ENST00000565003 HTTP42858 3142 aa12.29□□□□□ -0.44
CMTM3-209ENST00000565003 SIPA1L1O43166 1804 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 PDHXO00330 501 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 CTNND1O60716 968 aaKnown RBP12.28□□□□□ -0.44
CMTM3-209ENST00000565003 ANKRD23Q86SG2 305 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 AACSQ86V21 672 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.28□□□□□ -0.44
CMTM3-209ENST00000565003 IL1RAPL2Q9NP60 686 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 DDX19BQ9UMR2 479 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 NDUFB9Q9Y6M9 179 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 ZHX2Q9Y6X8 837 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 ADGRA2Q96PE1 1338 aa12.28□□□□□ -0.44
CMTM3-209ENST00000565003 PHIPQ8WWQ0 1821 aa12.27□□□□□ -0.44
CMTM3-209ENST00000565003 CDK5RAP2Q96SN8 1893 aa12.27□□□□□ -0.44
CMTM3-209ENST00000565003 PTPRFP10586 1907 aa12.27□□□□□ -0.44
CMTM3-209ENST00000565003 A0A0G2JLL6 359 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-209ENST00000565003 TBC1D12O60347 775 aa12.27□□□□□ -0.45
CMTM3-209ENST00000565003 LACTBP83111 547 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-209ENST00000565003 GPAT2Q6NUI2 795 aa12.27□□□□□ -0.45
CMTM3-209ENST00000565003 PRRT2Q7Z6L0 340 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-209ENST00000565003 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-209ENST00000565003 ARHGAP39Q9C0H5 1083 aa12.27□□□□□ -0.45
CMTM3-209ENST00000565003 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
CMTM3-209ENST00000565003 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
CMTM3-209ENST00000565003 FOCADQ5VW36 1801 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 CXCL11O14625 94 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 IDH1O75874 414 aaKnown RBP12.26□□□□□ -0.45
CMTM3-209ENST00000565003 BAG3O95817 575 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 PPP4CP60510 307 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
CMTM3-209ENST00000565003 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 C20orf194Q5TEA3 1177 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
CMTM3-209ENST00000565003 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
CMTM3-209ENST00000565003 TGFBRAP1Q8WUH2 860 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms