RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 RAD17O75943 681 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 CYP2D6P10635 497 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 RASSF7Q02833 373 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 TRDNQ13061 729 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 HHIPL2Q6UWX4 724 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 STK11IPQ8N1F8 1099 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 TEKT1Q969V4 418 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
SNX29-204ENST00000564791 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
SNX29-204ENST00000564791 ARPP21Q9UBL0 812 aaPredicted RBP13.31□□□□□ -0.28
SNX29-204ENST00000564791 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 ZNRF3Q9ULT6 936 aa13.31□□□□□ -0.28
SNX29-204ENST00000564791 LTBP3Q9NS15 1303 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 B4E1Z4 1266 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 PSMD14O00487 310 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 MCM5P33992 734 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 DDIT3P35638 169 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 CRKP46108 304 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 EVX2Q03828 476 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 ME3Q16798 604 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 SBK1Q52WX2 424 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 MFSD6Q6ZSS7 791 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 MAPKAPK5Q8IW41 473 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 BRF1Q92994 677 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
SNX29-204ENST00000564791 VIL1P09327 827 aaKnown RBP13.29□□□□□ -0.28
SNX29-204ENST00000564791 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 FGD1P98174 961 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 RSBN1LQ6PCB5 846 aaPredicted RBP13.29□□□□□ -0.28
SNX29-204ENST00000564791 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 AGXT2Q9BYV1 514 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 RNF41Q9H4P4 317 aaPredicted RBP13.29□□□□□ -0.28
SNX29-204ENST00000564791 CNNM2Q9H8M5 875 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
SNX29-204ENST00000564791 FLT1P17948 1338 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
SNX29-204ENST00000564791 HDLBPQ00341 1268 aaKnown RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 RRP12Q5JTH9 1297 aaKnown RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 APOBEC3HQ6NTF7 200 aaKnown RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 KRT23Q9C075 422 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 SAP30BPQ9UHR5 308 aaKnown RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 PCDHAC2Q9Y5I4 1007 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 MYO3BQ8WXR4 1341 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 KDM4AO75164 1064 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 PRELPP51888 382 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 APOBRQ0VD83 1088 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 SLC4A8Q2Y0W8 1093 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 CDC42EP5Q6NZY7 148 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 FBXL16Q8N461 479 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 INTS4Q96HW7 963 aaKnown RBP13.28□□□□□ -0.28
SNX29-204ENST00000564791 GMLQ99445 158 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 SERPINA10Q9UK55 444 aa13.28□□□□□ -0.28
SNX29-204ENST00000564791 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.28
SNX29-204ENST00000564791 ROBO3Q96MS0 1386 aa13.27□□□□□ -0.29
SNX29-204ENST00000564791 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.29
SNX29-204ENST00000564791 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX29-204ENST00000564791 CXCL9Q07325 125 aa13.27□□□□□ -0.29
SNX29-204ENST00000564791 C12orf60Q5U649 245 aa13.27□□□□□ -0.29
SNX29-204ENST00000564791 CHMP5Q9NZZ3 219 aa13.27□□□□□ -0.29
SNX29-204ENST00000564791 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNX29-204ENST00000564791 SBF1O95248 1867 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 SH2B2O14492 632 aaPredicted RBP13.26□□□□□ -0.29
SNX29-204ENST00000564791 PRDM1O75626 825 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 SLC3A2P08195 630 aaKnown RBP13.26□□□□□ -0.29
SNX29-204ENST00000564791 FGRP09769 529 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 STK3Q13188 491 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 PICALMQ13492 652 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 CFAP100Q494V2 611 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 AMOTL1Q8IY63 956 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 DDX4Q9NQI0 724 aaKnown RBP13.26□□□□□ -0.29
SNX29-204ENST00000564791 ZSWIM5Q9P217 1185 aa13.26□□□□□ -0.29
SNX29-204ENST00000564791 CIZ1Q9ULV3 898 aaPredicted RBP13.26□□□□□ -0.29
SNX29-204ENST00000564791 ZBTB12Q9Y330 459 aaPredicted RBP13.26□□□□□ -0.29
SNX29-204ENST00000564791 ORC4O43929 436 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
SNX29-204ENST00000564791 PCP11498 1178 aaKnown RBP13.25□□□□□ -0.29
SNX29-204ENST00000564791 CIAPIN1Q6FI81 312 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 ESR2Q92731 530 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 SYT17Q9BSW7 474 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
SNX29-204ENST00000564791 MYH8P13535 1937 aa13.25□□□□□ -0.29
SNX29-204ENST00000564791 PFKFB2O60825 505 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 PLCD1P51178 756 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 GTF3C6Q969F1 213 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 BRPF3Q9ULD4 1205 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 ANGEL1Q9UNK9 670 aaKnown RBP13.24□□□□□ -0.29
SNX29-204ENST00000564791 SIPA1L1O43166 1804 aa13.24□□□□□ -0.29
SNX29-204ENST00000564791 KLF18A0A0U1RQI7 1052 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms