RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	SBK1	Q52WX2	424 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	RASEF	Q8IZ41	740 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	KIF2C	Q99661	725 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	TSHZ2	Q9NRE2	1034 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	USP40	Q9NVE5	1235 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	ANAPC4	Q9UJX5	808 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	PALD1	Q9ULE6	856 aa		11.73	□□□□□ -0.53
SIN3A-205	ENST00000564778	ATRNL1	Q5VV63	1379 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778		H7C1D1	291 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	WNT10B	O00744	389 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	EGFR	P00533	1210 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	VEGFA	P15692	232 aa	Predicted RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	ZKSCAN1	P17029	563 aa	Predicted RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	USP5	P45974	858 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	NFIA	Q12857	509 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	IMMT	Q16891	758 aa	Known RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	KIF4B	Q2VIQ3	1234 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	RBM46	Q8TBY0	533 aa	Known RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	TGFBRAP1	Q8WUH2	860 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	DDRGK1	Q96HY6	314 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	RRAGC	Q9HB90	399 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	DDX4	Q9NQI0	724 aa	Known RBP	11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	SNX14	Q9Y5W7	946 aa		11.72	□□□□□ -0.53
SIN3A-205	ENST00000564778	MYO1B	O43795	1136 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	ENTPD3	O75355	529 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	LMOD1	P29536	600 aa	Predicted RBP	11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	KRT32	Q14532	448 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	CTR9	Q6PD62	1173 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	MAPKAPK5	Q8IW41	473 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	NBPF3	Q9H094	633 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	TDRD3	Q9H7E2	651 aa	Known RBP	11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	ADARB2	Q9NS39	739 aa	Known RBP	11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	TMOD2	Q9NZR1	351 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	ZNF70	Q9UC06	446 aa	Predicted RBP	11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	FAM198A	Q9UFP1	575 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	TAOK2	Q9UL54	1235 aa		11.71	□□□□□ -0.53
SIN3A-205	ENST00000564778	SIPA1L1	O43166	1804 aa		11.71	□□□□□ -0.54
SIN3A-205	ENST00000564778	USP17L12	C9JPN9	530 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	USP17L21	D6R901	530 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	ZNF213	O14771	459 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	FGR	P09769	529 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	PC	P11498	1178 aa	Known RBP	11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	EPS15	P42566	896 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	NT5C2	P49902	561 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	PPARA	Q07869	468 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	NBPF9	Q3BBW0	867 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	C12orf60	Q5U649	245 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	SAMD7	Q7Z3H4	446 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	FAM83A	Q86UY5	434 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	TBC1D10C	Q8IV04	446 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	IL27	Q8NEV9	243 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	TRPM4	Q8TD43	1214 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	TM6SF1	Q9BZW5	370 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	MCM9	Q9NXL9	1143 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	TAF6L	Q9Y6J9	622 aa		11.7	□□□□□ -0.54
SIN3A-205	ENST00000564778	CEP350	Q5VT06	3117 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	CNTNAP1	P78357	1384 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	PITPNM2	Q9BZ72	1349 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	IQCA1L	A6NCM1	817 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	HSPA6	P17066	643 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	CACNB3	P54284	484 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	HAND2	P61296	217 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	FSTL1	Q12841	308 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	PICALM	Q13492	652 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	RABEP1	Q15276	862 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	STOX1	Q6ZVD7	989 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	AMOTL1	Q8IY63	956 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	SMC1B	Q8NDV3	1235 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	STAG1	Q8WVM7	1258 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	EHD4	Q9H223	541 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	DHX36	Q9H2U1	1008 aa	Known RBP	11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	HACL1	Q9UJ83	578 aa		11.69	□□□□□ -0.54
SIN3A-205	ENST00000564778	CYP2D7	A0A087X1C5	515 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	CLRN2	A0PK11	232 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778		E7EWF7	191 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	CYP2D6	P10635	497 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	HIRA	P54198	1017 aa	Predicted RBP	11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	GABPA	Q06546	454 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	TNFAIP1	Q13829	316 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	ADCK5	Q3MIX3	580 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	AKNAD1	Q5T1N1	836 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	USP50	Q70EL3	339 aa	Predicted RBP	11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	FAM151A	Q8WW52	585 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	RNF41	Q9H4P4	317 aa	Predicted RBP	11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	PGAP2	Q9UHJ9	254 aa		11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
SIN3A-205	ENST00000564778	NEDD4	P46934	1319 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	MINDY4B	A8MYZ0	360 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	POTEC	B2RU33	542 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	SMIM22	K7EJ46	135 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	ORC4	O43929	436 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	POLR3D	P05423	398 aa	Predicted RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	SLC3A2	P08195	630 aa	Known RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	HMGB1	P09429	215 aa	Known RBP	11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	PSMA5	P28066	241 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	EVX2	Q03828	476 aa		11.67	□□□□□ -0.54
SIN3A-205	ENST00000564778	C16orf86	Q6ZW13	317 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms