RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 TMEM39BQ9GZU3 492 aa18.63■□□□□ 0.57
CDH11-209ENST00000564317 EPB41L4AQ9HCS5 686 aaPredicted RBP18.63■□□□□ 0.57
CDH11-209ENST00000564317 MKRN1Q9UHC7 482 aaKnown RBP18.63■□□□□ 0.57
CDH11-209ENST00000564317 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
CDH11-209ENST00000564317 GSG1L2A8MUP6 293 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 ENTPD3O75355 529 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
CDH11-209ENST00000564317 SH3BP5LQ7L8J4 393 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 FAM83AQ86UY5 434 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 SULF1Q8IWU6 871 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 RUFY2Q8WXA3 655 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 OSBPL5Q9H0X9 879 aaPredicted RBP18.62■□□□□ 0.57
CDH11-209ENST00000564317 DEFB129Q9H1M3 183 aa18.62■□□□□ 0.57
CDH11-209ENST00000564317 DCP1AQ9NPI6 582 aaPredicted RBP18.62■□□□□ 0.57
CDH11-209ENST00000564317 NAV1Q8NEY1 1877 aa18.61■□□□□ 0.57
CDH11-209ENST00000564317 TNFAIP1Q13829 316 aa18.61■□□□□ 0.57
CDH11-209ENST00000564317 PRAMEF18Q5VWM3 479 aa18.61■□□□□ 0.57
CDH11-209ENST00000564317 FAM151AQ8WW52 585 aa18.61■□□□□ 0.57
CDH11-209ENST00000564317 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
CDH11-209ENST00000564317 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
CDH11-209ENST00000564317 RPAP1Q9BWH6 1393 aaPredicted RBP18.6■□□□□ 0.57
CDH11-209ENST00000564317 TRAF5O00463 557 aa18.6■□□□□ 0.57
CDH11-209ENST00000564317 GNAT2P19087 354 aa18.6■□□□□ 0.57
CDH11-209ENST00000564317 TNNI2P48788 182 aa18.6■□□□□ 0.57
CDH11-209ENST00000564317 FMR1Q06787 632 aaKnown RBP eCLIP18.6■□□□□ 0.57
CDH11-209ENST00000564317 CDC37L1Q7L3B6 337 aa18.6■□□□□ 0.57
CDH11-209ENST00000564317 SSC5DA1L4H1 1573 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 COL2A1P02458 1487 aaPredicted RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 POLR2AP24928 1970 aaKnown RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 PATL2C9JE40 543 aaKnown RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 CYP2D6P10635 497 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 HSPD1P10809 573 aaKnown RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 EVX2Q03828 476 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 CASC1Q6TDU7 716 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 RBM46Q8TBY0 533 aaKnown RBP18.59■□□□□ 0.57
CDH11-209ENST00000564317 CDCA5Q96FF9 252 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
CDH11-209ENST00000564317 ATRNL1Q5VV63 1379 aa18.58■□□□□ 0.57
CDH11-209ENST00000564317 TOMM70O94826 608 aa18.58■□□□□ 0.56
CDH11-209ENST00000564317 ITGBL1O95965 494 aaPredicted RBP18.58■□□□□ 0.56
CDH11-209ENST00000564317 MFAP1P55081 439 aaKnown RBP18.58■□□□□ 0.56
CDH11-209ENST00000564317 NBPF12Q5TAG4 269 aaPredicted RBP18.58■□□□□ 0.56
CDH11-209ENST00000564317 IFNL3Q8IZI9 196 aa18.58■□□□□ 0.56
CDH11-209ENST00000564317 SMC1BQ8NDV3 1235 aa18.58■□□□□ 0.56
CDH11-209ENST00000564317 PALD1Q9ULE6 856 aa18.58■□□□□ 0.56
CDH11-209ENST00000564317 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 SMIM22K7EJ46 135 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 APPP05067 770 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 SLURP2P0DP57 97 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 PTH1RQ03431 593 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 MCM9Q9NXL9 1143 aa18.57■□□□□ 0.56
CDH11-209ENST00000564317 SIPA1L1O43166 1804 aa18.56■□□□□ 0.56
CDH11-209ENST00000564317 TDO2P48775 406 aa18.56■□□□□ 0.56
CDH11-209ENST00000564317 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
CDH11-209ENST00000564317 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
CDH11-209ENST00000564317 ZSCAN29Q8IWY8 852 aaPredicted RBP18.56■□□□□ 0.56
CDH11-209ENST00000564317 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
CDH11-209ENST00000564317 LSG1Q9H089 658 aaKnown RBP18.56■□□□□ 0.56
CDH11-209ENST00000564317 BAZ2AQ9UIF9 1905 aaKnown RBP18.55■□□□□ 0.56
CDH11-209ENST00000564317 USP17L12C9JPN9 530 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 USP17L21D6R901 530 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 PLCD1P51178 756 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 ALX1Q15699 326 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 CSRNP1Q96S65 589 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 NACAP1Q9BZK3 213 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 MYH1P12882 1939 aa18.55■□□□□ 0.56
CDH11-209ENST00000564317 PASKQ96RG2 1323 aa18.54■□□□□ 0.56
CDH11-209ENST00000564317 FGAP02671 866 aa18.54■□□□□ 0.56
CDH11-209ENST00000564317 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
CDH11-209ENST00000564317 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
CDH11-209ENST00000564317 NAPBQ9H115 298 aa18.54■□□□□ 0.56
CDH11-209ENST00000564317 DHX36Q9H2U1 1008 aaKnown RBP18.54■□□□□ 0.56
CDH11-209ENST00000564317 ANO2Q9NQ90 1003 aa18.54■□□□□ 0.56
CDH11-209ENST00000564317 ARPP21Q9UBL0 812 aaPredicted RBP18.54■□□□□ 0.56
CDH11-209ENST00000564317 ZMYM6O95789 1325 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 SBK1Q52WX2 424 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 C12orf60Q5U649 245 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 DNAJC18Q9H819 358 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 FZD1Q9UP38 647 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 LAMB1P07942 1786 aa18.53■□□□□ 0.56
CDH11-209ENST00000564317 FAM196BA6NMK8 535 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 HLA-DOAP06340 250 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 FSTL1Q12841 308 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 MIGA2Q7L4E1 593 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 ZNF408Q9H9D4 720 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 PI4KBQ9UBF8 816 aa18.52■□□□□ 0.56
CDH11-209ENST00000564317 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 GABPAQ06546 454 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 SUPT20HL1Q3ZLR7 823 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 TTC6Q86TZ1 520 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
CDH11-209ENST00000564317 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 DYNLL2Q96FJ2 89 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 EHD4Q9H223 541 aa18.51■□□□□ 0.55
CDH11-209ENST00000564317 RBM8AQ9Y5S9 174 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms