RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MYO5AQ9Y4I1 1855 aaKnown RBP24.48■■□□□ 1.51
SHCBP1-203ENST00000564272 CCDC85CA6NKD9 419 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 APBB1O00213 710 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 LDHCP07864 332 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 AACSQ86V21 672 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 ERO1BQ86YB8 467 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 ZSCAN29Q8IWY8 852 aaPredicted RBP24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 RPAP2Q8IXW5 612 aaPredicted RBP24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 IL1RAPL2Q9NP60 686 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 ZNF112Q9UJU3 913 aa24.47■■□□□ 1.51
SHCBP1-203ENST00000564272 CCL15-CCL14A0A0B4J2E2 113 aa24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 DDTLA6NHG4 134 aaPredicted RBP24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 GTF2A2P52657 109 aa24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 CCL15Q16663 113 aa24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 RHPN1Q8TCX5 695 aa24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 PIH1D3Q9NQM4 214 aaKnown RBP24.46■■□□□ 1.51
SHCBP1-203ENST00000564272 HMMRO75330 724 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 SLURP2P0DP57 97 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 CRHR2Q13324 411 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 PDE3AQ14432 1141 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 HSP90AB4PQ58FF6 505 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 OTUD7BQ6GQQ9 843 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 NDUFB9Q9Y6M9 179 aa24.45■■□□□ 1.5
SHCBP1-203ENST00000564272 IRF6O14896 467 aa24.44■■□□□ 1.5
SHCBP1-203ENST00000564272 FKTNO75072 461 aa24.44■■□□□ 1.5
SHCBP1-203ENST00000564272 PPIL2Q13356 520 aa24.44■■□□□ 1.5
SHCBP1-203ENST00000564272 NAA16Q6N069 864 aaPredicted RBP24.44■■□□□ 1.5
SHCBP1-203ENST00000564272 CHMP4BQ9H444 224 aaKnown RBP24.44■■□□□ 1.5
SHCBP1-203ENST00000564272 ADGRA1Q86SQ6 560 aa24.43■■□□□ 1.5
SHCBP1-203ENST00000564272 NOL9Q5SY16 702 aaKnown RBP24.42■■□□□ 1.5
SHCBP1-203ENST00000564272 TEX11Q8IYF3 940 aa24.42■■□□□ 1.5
SHCBP1-203ENST00000564272 FAM43AQ8N2R8 423 aa24.42■■□□□ 1.5
SHCBP1-203ENST00000564272 SH3RF3Q8TEJ3 882 aaPredicted RBP24.42■■□□□ 1.5
SHCBP1-203ENST00000564272 AATFQ9NY61 560 aaKnown RBP eCLIP24.42■■□□□ 1.5
SHCBP1-203ENST00000564272 PHF20L1A8MW92 1017 aa24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 MAP4K4O95819 1239 aaPredicted RBP24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 PPATQ06203 517 aa24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 SNAPC2Q13487 334 aa24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 KIF1BPQ96EK5 621 aa24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 NOL10Q9BSC4 688 aaKnown RBP24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 BCL11AQ9H165 835 aa24.41■■□□□ 1.5
SHCBP1-203ENST00000564272 NPM3O75607 178 aaKnown RBP24.4■■□□□ 1.5
SHCBP1-203ENST00000564272 CETPP11597 493 aa24.4■■□□□ 1.5
SHCBP1-203ENST00000564272 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
SHCBP1-203ENST00000564272 COL2A1P02458 1487 aaPredicted RBP24.39■■□□□ 1.5
SHCBP1-203ENST00000564272 TAF1CQ15572 869 aaPredicted RBP24.39■■□□□ 1.49
SHCBP1-203ENST00000564272 CLASRPQ8N2M8 674 aaKnown RBP24.39■■□□□ 1.49
SHCBP1-203ENST00000564272 ANTXR1Q9H6X2 564 aa24.39■■□□□ 1.49
SHCBP1-203ENST00000564272 CDK5RAP2Q96SN8 1893 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 FAM196BA6NMK8 535 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 BTBD19C9JJ37 291 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 IDH1O75874 414 aaKnown RBP24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 MAP3K10Q02779 954 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 SCYL3Q8IZE3 742 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 DOCK1Q14185 1865 aa24.38■■□□□ 1.49
SHCBP1-203ENST00000564272 RAB11FIP3O75154 756 aa24.37■■□□□ 1.49
SHCBP1-203ENST00000564272 BAG3O95817 575 aa24.37■■□□□ 1.49
SHCBP1-203ENST00000564272 KCNH4Q9UQ05 1017 aa24.37■■□□□ 1.49
SHCBP1-203ENST00000564272 FOCADQ5VW36 1801 aa24.37■■□□□ 1.49
SHCBP1-203ENST00000564272 IFIT2P09913 472 aaKnown RBP24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 PLCG2P16885 1265 aa24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 CYP7A1P22680 504 aa24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 PPP4CP60510 307 aa24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 PKN2Q16513 984 aaKnown RBP24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
SHCBP1-203ENST00000564272 SIPA1L1O43166 1804 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 MAPKAPK5Q8IW41 473 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 MAGEB6Q8N7X4 407 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 CD99L2Q8TCZ2 262 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 TGFBRAP1Q8WUH2 860 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 ZFYVE28Q9HCC9 887 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 PICK1Q9NRD5 415 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 HPS5Q9UPZ3 1129 aa24.35■■□□□ 1.49
SHCBP1-203ENST00000564272 IGSF3O75054 1194 aa24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 PTPRAP18433 802 aa24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 DYNLL1P63167 89 aaKnown RBP24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 MIGA1Q8NAN2 632 aa24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 ERO1AQ96HE7 468 aa24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 FLT1P17948 1338 aa24.34■■□□□ 1.49
SHCBP1-203ENST00000564272 TBC1D12O60347 775 aa24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 CTNND1O60716 968 aaKnown RBP24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 SP3Q02447 781 aa24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 MOGSQ13724 837 aa24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 ZCCHC17Q9NP64 241 aaKnown RBP24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 TRIM17Q9Y577 477 aa24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 ZHX2Q9Y6X8 837 aa24.33■■□□□ 1.49
SHCBP1-203ENST00000564272 PHIPQ8WWQ0 1821 aa24.33■■□□□ 1.48
SHCBP1-203ENST00000564272 CAP1Q01518 475 aa24.32■■□□□ 1.48
SHCBP1-203ENST00000564272 FBXO46Q6PJ61 603 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-203ENST00000564272 OTOP1Q7RTM1 612 aa24.32■■□□□ 1.48
SHCBP1-203ENST00000564272 CCDC84Q86UT8 332 aaPredicted RBP24.32■■□□□ 1.48
SHCBP1-203ENST00000564272 MAP3K12Q12852 859 aa24.31■■□□□ 1.48
SHCBP1-203ENST00000564272 ANKRD23Q86SG2 305 aa24.31■■□□□ 1.48
SHCBP1-203ENST00000564272 DNAJC2Q99543 621 aaKnown RBP24.31■■□□□ 1.48
SHCBP1-203ENST00000564272 ATAD5Q96QE3 1844 aa24.31■■□□□ 1.48
SHCBP1-203ENST00000564272 CXCL11O14625 94 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms