RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SARM1Q6SZW1 724 aa14.25□□□□□ -0.13
COMMD4-209ENST00000564068 RGS22Q8NE09 1264 aa14.25□□□□□ -0.13
COMMD4-209ENST00000564068 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
COMMD4-209ENST00000564068 USP5P45974 858 aa14.25□□□□□ -0.13
COMMD4-209ENST00000564068 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
COMMD4-209ENST00000564068 HELBQ8NG08 1087 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-209ENST00000564068 HPDP32754 393 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-209ENST00000564068 CFAP58Q5T655 872 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 IFNL2Q8IZJ0 200 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 ZNF274Q96GC6 653 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-209ENST00000564068 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 TCP11L1Q9NUJ3 509 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 RMND1Q9NWS8 449 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 RTEL1Q9NZ71 1219 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 MYOM2P54296 1465 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 AK9Q5TCS8 1911 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 KDM4FA0A1W2PPD8 638 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 STX10O60499 249 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 SLFN14P0C7P3 912 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 PROSER3Q2NL68 480 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 PAXIP1Q6ZW49 1069 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-209ENST00000564068 TMTC1Q8IUR5 882 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 GPAA1O43292 621 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 HSPD1P10809 573 aaKnown RBP14.24□□□□□ -0.13
COMMD4-209ENST00000564068 MCM7P33993 719 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 RILPL1Q5EBL4 403 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 CYP26C1Q6V0L0 522 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 LINC00301Q8NCQ3 95 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 FAM204AQ9H8W3 233 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 SYNRGQ9UMZ2 1314 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 IQGAP3Q86VI3 1631 aa14.24□□□□□ -0.13
COMMD4-209ENST00000564068 ZMYND10O75800 440 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 TOB2Q14106 344 aaPredicted RBP14.23□□□□□ -0.13
COMMD4-209ENST00000564068 CCDC121Q6ZUS5 278 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 DBNLQ9UJU6 430 aaKnown RBP14.23□□□□□ -0.13
COMMD4-209ENST00000564068 A0A1W2PQ27 194 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 A0A1W2PQ64 194 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 A0A1W2PQD8 194 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 HOXB7P09629 217 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 CCDC40Q4G0X9 1142 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 SRGAP1Q7Z6B7 1085 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 GOLPH3LQ9H4A5 285 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 PHLPP2Q6ZVD8 1323 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 COBLO75128 1261 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 NEFHP12036 1026 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 WWC2Q6AWC2 1192 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 CDC23Q9UJX2 597 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 hCG_1642624A0A1W2PR95 340 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 ATP8B1O43520 1251 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 SF3A3Q12874 501 aaKnown RBP eCLIP14.23□□□□□ -0.13
COMMD4-209ENST00000564068 BCAS4Q8TDM0 211 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 KRT23Q9C075 422 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
COMMD4-209ENST00000564068 CCDC151A5D8V7 595 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 TBC1D8BQ0IIM8 1120 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 SLFNL1Q499Z3 407 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 NBPF6Q5VWK0 638 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 TTC19Q6DKK2 380 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 NBPF4Q96M43 638 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 METTL22Q9BUU2 404 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 ERCC3P19447 782 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 CCT5P48643 541 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 TUBB2AQ13885 445 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 SLC35F6Q8N357 371 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 MIGA1Q8NAN2 632 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 EXOC4Q96A65 974 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 TUBB2BQ9BVA1 445 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 EXOC1Q9NV70 894 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 CLTCL1P53675 1640 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 PPP1R1BQ9UD71 204 aaPredicted RBP14.22□□□□□ -0.13
COMMD4-209ENST00000564068 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 ADCY9O60503 1353 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 TMEM94Q12767 1356 aa14.22□□□□□ -0.13
COMMD4-209ENST00000564068 PLEKHG3A1L390 1219 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 ENC1O14682 589 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 SLC5A1P13866 664 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 ASIC1P78348 528 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 CMTR1Q8N1G2 835 aaKnown RBP14.21□□□□□ -0.13
COMMD4-209ENST00000564068 EEF2KMTQ96G04 330 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 WWC3Q9ULE0 1092 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 EYA2O00167 538 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-209ENST00000564068 BMP15O95972 392 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 CC2D1AQ6P1N0 951 aaPredicted RBP14.21□□□□□ -0.13
COMMD4-209ENST00000564068 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 BLZF1Q9H2G9 400 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 VAT1LQ9HCJ6 419 aa14.21□□□□□ -0.13
COMMD4-209ENST00000564068 BTBD18B2RXH4 712 aa14.21□□□□□ -0.14
COMMD4-209ENST00000564068 SASH1O94885 1247 aa14.21□□□□□ -0.14
COMMD4-209ENST00000564068 POLA2Q14181 598 aa14.21□□□□□ -0.14
COMMD4-209ENST00000564068 IFIT1BQ5T764 474 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms