RNA–Protein interactions for RNA: ENST00000563920.1

CBFA2T3-206, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 1,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-206ENST00000563920 USP17L4A6NCW7 530 aa20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 MCM5P33992 734 aa20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 USP17L1Q7RTZ2 530 aa20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 SH2B1Q9NRF2 756 aaPredicted RBP20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 ATP8A2Q9NTI2 1148 aa20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 SUGT1Q9Y2Z0 365 aa20.68■□□□□ 0.9
CBFA2T3-206ENST00000563920 BAG3O95817 575 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 MAPKAPK5Q8IW41 473 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 KDM4AO75164 1064 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 MYH1P12882 1939 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 GRIPAP1Q4V328 841 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 RRP12Q5JTH9 1297 aaKnown RBP20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 MFSD6Q6ZSS7 791 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 ZSWIM5Q9P217 1185 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 ZDHHC9Q9Y397 364 aa20.67■□□□□ 0.9
CBFA2T3-206ENST00000563920 NFKBIEO00221 500 aa20.66■□□□□ 0.9
CBFA2T3-206ENST00000563920 USP5P45974 858 aa20.66■□□□□ 0.9
CBFA2T3-206ENST00000563920 LARGE2Q8N3Y3 721 aa20.66■□□□□ 0.9
CBFA2T3-206ENST00000563920 MCM9Q9NXL9 1143 aa20.66■□□□□ 0.9
CBFA2T3-206ENST00000563920 PRDM1O75626 825 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 FGD1P98174 961 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 TEX11Q8IYF3 940 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 FBXL16Q8N461 479 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 SAP30BPQ9UHR5 308 aaKnown RBP20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 BCS1LQ9Y276 419 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 WDR19Q8NEZ3 1342 aa20.65■□□□□ 0.9
CBFA2T3-206ENST00000563920 TRDNQ13061 729 aa20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 RAB3GAP1Q15042 981 aa20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 SBK1Q52WX2 424 aa20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 RAB11FIP4Q86YS3 637 aa20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 CWC22Q9HCG8 908 aaKnown RBP20.64■□□□□ 0.9
CBFA2T3-206ENST00000563920 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 SH2B2O14492 632 aaPredicted RBP20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 RAD17O75943 681 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 PRELPP51888 382 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 FKBP1AP62942 108 aaKnown RBP20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 SCRN1Q12765 414 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 APOBEC3HQ6NTF7 200 aaKnown RBP20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 SLF2Q8IX21 1173 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 IGDCC4Q8TDY8 1250 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 GTF3C6Q969F1 213 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 TOMM22Q9NS69 142 aa20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.64■□□□□ 0.89
CBFA2T3-206ENST00000563920 FLT1P17948 1338 aa20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 FGRP09769 529 aa20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 PDIA3P30101 505 aaKnown RBP20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 CRKP46108 304 aa20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 C12orf60Q5U649 245 aa20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 DYNLL2Q96FJ2 89 aa20.63■□□□□ 0.89
CBFA2T3-206ENST00000563920 PFKFB2O60825 505 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 IARSP41252 1262 aaKnown RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 EVCP57679 992 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 NBR1Q14596 966 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 NFKBIBQ15653 356 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 SOGA3Q5TF21 947 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 HHIPL2Q6UWX4 724 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 TNPO1Q92973 898 aaKnown RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 NCOA5Q9HCD5 579 aaKnown RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 ARPP21Q9UBL0 812 aaPredicted RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 PSMD14O00487 310 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 WDHD1O75717 1129 aaPredicted RBP20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 PLCD1P51178 756 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 CDC42EP5Q6NZY7 148 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 KRT23Q9C075 422 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 CNNM2Q9H8M5 875 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 LY9Q9HBG7 655 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 HPS5Q9UPZ3 1129 aa20.62■□□□□ 0.89
CBFA2T3-206ENST00000563920 JAK2O60674 1132 aa20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 GJB2P29033 226 aa20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 RASSF7Q02833 373 aa20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 TEKT1Q969V4 418 aa20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 SPON1Q9HCB6 807 aa20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 NAP1L2Q9ULW6 460 aaPredicted RBP20.61■□□□□ 0.89
CBFA2T3-206ENST00000563920 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 CTDNEP1O95476 244 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 FOXD4L5Q5VV16 416 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 FOXD4L4Q8WXT5 416 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 TAOK3Q9H2K8 898 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 RNF41Q9H4P4 317 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 USP40Q9NVE5 1235 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 ANGEL1Q9UNK9 670 aaKnown RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 SMC3Q9UQE7 1217 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 SLC44A5Q8NCS7 719 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 ZNF274Q96GC6 653 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 CHAMP1Q96JM3 812 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 ZDHHC15Q96MV8 337 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 GMLQ99445 158 aa20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 ZBTB12Q9Y330 459 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.6■□□□□ 0.89
CBFA2T3-206ENST00000563920 PPFIA3O75145 1194 aa20.59■□□□□ 0.89
CBFA2T3-206ENST00000563920 VIL1P09327 827 aaKnown RBP20.59■□□□□ 0.89
CBFA2T3-206ENST00000563920 PLCG2P16885 1265 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms