RNA–Protein interactions for RNA: ENST00000563783.5

SPG7-208, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-208ENST00000563783 ARHGEF6Q15052 776 aa30.95■■■□□ 2.55
SPG7-208ENST00000563783 OTOP1Q7RTM1 612 aa30.95■■■□□ 2.55
SPG7-208ENST00000563783 NSUN4Q96CB9 384 aaKnown RBP30.95■■■□□ 2.55
SPG7-208ENST00000563783 SURF6O75683 361 aaKnown RBP30.94■■■□□ 2.54
SPG7-208ENST00000563783 OS9Q13438 667 aaPredicted RBP30.94■■■□□ 2.54
SPG7-208ENST00000563783 FAM43AQ8N2R8 423 aa30.94■■■□□ 2.54
SPG7-208ENST00000563783 ZNF384Q8TF68 577 aa30.94■■■□□ 2.54
SPG7-208ENST00000563783 TRIM17Q9Y577 477 aa30.94■■■□□ 2.54
SPG7-208ENST00000563783 HTTP42858 3142 aa30.93■■■□□ 2.54
SPG7-208ENST00000563783 DOCK1Q14185 1865 aa30.93■■■□□ 2.54
SPG7-208ENST00000563783 TNRC18O15417 2968 aaPredicted RBP30.93■■■□□ 2.54
SPG7-208ENST00000563783 RHBDL3P58872 404 aa30.93■■■□□ 2.54
SPG7-208ENST00000563783 CCDC158Q5M9N0 1113 aa30.93■■■□□ 2.54
SPG7-208ENST00000563783 ZFPM1Q8IX07 1006 aa30.92■■■□□ 2.54
SPG7-208ENST00000563783 PHF20L1A8MW92 1017 aa30.91■■■□□ 2.54
SPG7-208ENST00000563783 PI16Q6UXB8 463 aa30.91■■■□□ 2.54
SPG7-208ENST00000563783 RBBP6Q7Z6E9 1792 aaKnown RBP30.91■■■□□ 2.54
SPG7-208ENST00000563783 PTPRFP10586 1907 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 TBC1D12O60347 775 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 TLR2O60603 784 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 ANKRD23Q86SG2 305 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 C1orf115Q9H7X2 142 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 EFCC1Q9HA90 598 aa30.9■■■□□ 2.54
SPG7-208ENST00000563783 KIAA0100Q14667 2235 aaKnown RBP30.89■■■□□ 2.54
SPG7-208ENST00000563783 BTBD19C9JJ37 291 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 CXCL11O14625 94 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 TTC39AQ5SRH9 613 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 CEP85Q6P2H3 762 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 SH3BP5LQ7L8J4 393 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 CD99L2Q8TCZ2 262 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 DDX4Q9NQI0 724 aaKnown RBP30.89■■■□□ 2.54
SPG7-208ENST00000563783 RAI14Q9P0K7 980 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 LRP2BPQ9P2M1 347 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 PTPN22Q9Y2R2 807 aa30.89■■■□□ 2.54
SPG7-208ENST00000563783 FOCADQ5VW36 1801 aa30.89■■■□□ 2.53
SPG7-208ENST00000563783 SOX10P56693 466 aa30.88■■■□□ 2.53
SPG7-208ENST00000563783 TBC1D9Q6ZT07 1266 aa30.88■■■□□ 2.53
SPG7-208ENST00000563783 ZSCAN29Q8IWY8 852 aaPredicted RBP30.88■■■□□ 2.53
SPG7-208ENST00000563783 SCYL3Q8IZE3 742 aa30.88■■■□□ 2.53
SPG7-208ENST00000563783 DBNDD2Q9BQY9 259 aa30.88■■■□□ 2.53
SPG7-208ENST00000563783 PHIPQ8WWQ0 1821 aa30.88■■■□□ 2.53
SPG7-208ENST00000563783 CDK5RAP2Q96SN8 1893 aa30.87■■■□□ 2.53
SPG7-208ENST00000563783 MYO5AQ9Y4I1 1855 aaKnown RBP30.87■■■□□ 2.53
SPG7-208ENST00000563783 CTNND1O60716 968 aaKnown RBP30.87■■■□□ 2.53
SPG7-208ENST00000563783 TMED8Q6PL24 325 aaPredicted RBP30.87■■■□□ 2.53
SPG7-208ENST00000563783 ERC1Q8IUD2 1116 aa30.87■■■□□ 2.53
SPG7-208ENST00000563783 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.87■■■□□ 2.53
SPG7-208ENST00000563783 DDTLA6NHG4 134 aaPredicted RBP30.86■■■□□ 2.53
SPG7-208ENST00000563783 GNRH1P01148 92 aa30.86■■■□□ 2.53
SPG7-208ENST00000563783 PLCG2P16885 1265 aa30.86■■■□□ 2.53
SPG7-208ENST00000563783 HSP90AB4PQ58FF6 505 aa30.85■■■□□ 2.53
SPG7-208ENST00000563783 PICK1Q9NRD5 415 aa30.85■■■□□ 2.53
SPG7-208ENST00000563783 PANK1Q8TE04 598 aa30.84■■■□□ 2.53
SPG7-208ENST00000563783 NOL10Q9BSC4 688 aaKnown RBP30.84■■■□□ 2.53
SPG7-208ENST00000563783 DBNLQ9UJU6 430 aaKnown RBP30.84■■■□□ 2.53
SPG7-208ENST00000563783 BAG3O95817 575 aa30.83■■■□□ 2.53
SPG7-208ENST00000563783 PPP4CP60510 307 aa30.83■■■□□ 2.53
SPG7-208ENST00000563783 PICALMQ13492 652 aa30.83■■■□□ 2.53
SPG7-208ENST00000563783 MOGSQ13724 837 aa30.83■■■□□ 2.53
SPG7-208ENST00000563783 ARMC5Q96C12 935 aa30.83■■■□□ 2.53
SPG7-208ENST00000563783 CHMP4BQ9H444 224 aaKnown RBP30.83■■■□□ 2.53
SPG7-208ENST00000563783 PTPRAP18433 802 aa30.82■■■□□ 2.52
SPG7-208ENST00000563783 NAA16Q6N069 864 aaPredicted RBP30.82■■■□□ 2.52
SPG7-208ENST00000563783 OSBPL5Q9H0X9 879 aaPredicted RBP30.82■■■□□ 2.52
SPG7-208ENST00000563783 DDX19BQ9UMR2 479 aa30.82■■■□□ 2.52
SPG7-208ENST00000563783 ATAD5Q96QE3 1844 aa30.82■■■□□ 2.52
SPG7-208ENST00000563783 ADGRA2Q96PE1 1338 aa30.81■■■□□ 2.52
SPG7-208ENST00000563783 CYP2E1P05181 493 aaPredicted RBP30.81■■■□□ 2.52
SPG7-208ENST00000563783 KIF22Q14807 665 aa30.81■■■□□ 2.52
SPG7-208ENST00000563783 FASTKD5Q7L8L6 764 aaKnown RBP30.81■■■□□ 2.52
SPG7-208ENST00000563783 CERS3Q8IU89 383 aa30.81■■■□□ 2.52
SPG7-208ENST00000563783 EAF2Q96CJ1 260 aaPredicted RBP30.81■■■□□ 2.52
SPG7-208ENST00000563783 A0A0G2JLL6 359 aaPredicted RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 PDHXO00330 501 aa30.8■■■□□ 2.52
SPG7-208ENST00000563783 PRMT2P55345 433 aa30.8■■■□□ 2.52
SPG7-208ENST00000563783 LACTBP83111 547 aaPredicted RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 C17orf99Q6UX52 265 aa30.8■■■□□ 2.52
SPG7-208ENST00000563783 PRRT2Q7Z6L0 340 aaPredicted RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 RPAP2Q8IXW5 612 aaPredicted RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 TBC1D2Q9BYX2 928 aa30.8■■■□□ 2.52
SPG7-208ENST00000563783 DHX36Q9H2U1 1008 aaKnown RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 HERC5Q9UII4 1024 aaKnown RBP30.8■■■□□ 2.52
SPG7-208ENST00000563783 SLC45A1Q9Y2W3 748 aa30.8■■■□□ 2.52
SPG7-208ENST00000563783 TEX11Q8IYF3 940 aa30.79■■■□□ 2.52
SPG7-208ENST00000563783 SNRKQ9NRH2 765 aa30.79■■■□□ 2.52
SPG7-208ENST00000563783 AFG3L2Q9Y4W6 797 aa30.79■■■□□ 2.52
SPG7-208ENST00000563783 ZHX2Q9Y6X8 837 aa30.79■■■□□ 2.52
SPG7-208ENST00000563783 CAP1Q01518 475 aa30.78■■■□□ 2.52
SPG7-208ENST00000563783 PARK7Q99497 189 aaKnown RBP30.78■■■□□ 2.52
SPG7-208ENST00000563783 HMMRO75330 724 aa30.77■■■□□ 2.52
SPG7-208ENST00000563783 SIPA1L1O43166 1804 aa30.77■■■□□ 2.52
SPG7-208ENST00000563783 ZAP70P43403 619 aa30.76■■■□□ 2.51
SPG7-208ENST00000563783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.76■■■□□ 2.51
SPG7-208ENST00000563783 ZBTB40Q9NUA8 1239 aa30.76■■■□□ 2.51
SPG7-208ENST00000563783 GPAT2Q6NUI2 795 aa30.75■■■□□ 2.51
SPG7-208ENST00000563783 SH3RF3Q8TEJ3 882 aaPredicted RBP30.75■■■□□ 2.51
SPG7-208ENST00000563783 TLR7Q9NYK1 1049 aaKnown RBP30.75■■■□□ 2.51
SPG7-208ENST00000563783 PI4KBQ9UBF8 816 aa30.75■■■□□ 2.51
SPG7-208ENST00000563783 RCAN3Q9UKA8 241 aa30.75■■■□□ 2.51
SPG7-208ENST00000563783 MGAMO43451 1857 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms