RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 BHLHE41Q9C0J9 482 aaPredicted RBP6.55□□□□□ -1.36
CDR2-203ENST00000563573 C7orf69Q9H7B7 122 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 EGFL7Q9UHF1 273 aa6.55□□□□□ -1.36
CDR2-203ENST00000563573 RPRD2Q5VT52 1461 aaKnown RBP6.54□□□□□ -1.36
CDR2-203ENST00000563573 CCDC144AA2RUR9 1427 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 EREGO14944 169 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 ABL1P00519 1130 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 CD97P48960 835 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 NLRP12P59046 1061 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 MTMR3Q13615 1198 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 NUTM2GQ5VZR2 741 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.54□□□□□ -1.36
CDR2-203ENST00000563573 GJD3Q8N144 294 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 ZKSCAN3Q9BRR0 538 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 ZFYVE28Q9HCC9 887 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 ABCC3O15438 1527 aa6.54□□□□□ -1.36
CDR2-203ENST00000563573 ARHGAP31Q2M1Z3 1444 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 CNTLNQ9NXG0 1405 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 SOX1O00570 391 aaPredicted RBP6.53□□□□□ -1.36
CDR2-203ENST00000563573 GAS2O43903 313 aaKnown RBP6.53□□□□□ -1.36
CDR2-203ENST00000563573 FZD6O60353 706 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 BMP3P12645 472 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 ACPPP15309 386 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 SSTR4P31391 388 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 PHLDB3Q6NSJ2 640 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 BEND4Q6ZU67 534 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 KCNF1Q9H3M0 494 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 ZFYVE1Q9HBF4 777 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 CYP4F12Q9HCS2 524 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 SLC52A1Q9NWF4 448 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
CDR2-203ENST00000563573 EFCAB6Q5THR3 1501 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 SIGLEC1Q9BZZ2 1709 aa6.53□□□□□ -1.36
CDR2-203ENST00000563573 MROH2AA6NES4 1674 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 FER1L4A9Z1Z3 1794 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 HMX2A2RU54 273 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 TRPA1O75762 1119 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 PDE4CQ08493 712 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 RGL3Q3MIN7 710 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 HP1BP3Q5SSJ5 553 aaPredicted RBP6.52□□□□□ -1.37
CDR2-203ENST00000563573 VN1R5Q7Z5H4 357 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 SMG8Q8ND04 991 aaKnown RBP6.52□□□□□ -1.37
CDR2-203ENST00000563573 ASAP3Q8TDY4 903 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 HHIPQ96QV1 700 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 FOXD3Q9UJU5 478 aaPredicted RBP6.52□□□□□ -1.37
CDR2-203ENST00000563573 ZMYM3Q14202 1370 aa6.52□□□□□ -1.37
CDR2-203ENST00000563573 PTPRTO14522 1441 aa6.51□□□□□ -1.37
CDR2-203ENST00000563573 TRPM2O94759 1503 aa6.51□□□□□ -1.37
CDR2-203ENST00000563573 KIAA1324LA8MWY0 1029 aaPredicted RBP6.51□□□□□ -1.37
CDR2-203ENST00000563573 PREPP48147 710 aa6.51□□□□□ -1.37
CDR2-203ENST00000563573 ZNF326Q5BKZ1 582 aaKnown RBP6.51□□□□□ -1.37
CDR2-203ENST00000563573 EXOSC6Q5RKV6 272 aaKnown RBP6.51□□□□□ -1.37
CDR2-203ENST00000563573 C12orf50Q8NA57 414 aaPredicted RBP6.51□□□□□ -1.37
CDR2-203ENST00000563573 BRPF3Q9ULD4 1205 aa6.51□□□□□ -1.37
CDR2-203ENST00000563573 PREX1Q8TCU6 1659 aa6.51□□□□□ -1.37
CDR2-203ENST00000563573 NPATQ14207 1427 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 PLA2R1Q13018 1463 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 ICMTO60725 284 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
CDR2-203ENST00000563573 PDE3BQ13370 1112 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
CDR2-203ENST00000563573 YIPF2Q9BWQ6 316 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 USP26Q9BXU7 913 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 TMPRSS13Q9BYE2 586 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 CCDC87Q9NVE4 849 aa6.5□□□□□ -1.37
CDR2-203ENST00000563573 TGFB1P01137 390 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 ZNF211Q13398 564 aaPredicted RBP6.49□□□□□ -1.37
CDR2-203ENST00000563573 CPSF6Q16630 551 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDR2-203ENST00000563573 PEAR1Q5VY43 1037 aaPredicted RBP6.49□□□□□ -1.37
CDR2-203ENST00000563573 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 GALNT12Q8IXK2 581 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 CITED4Q96RK1 184 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 NOS1P29475 1434 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 RPGRIP1LQ68CZ1 1315 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 C3P01024 1663 aa6.49□□□□□ -1.37
CDR2-203ENST00000563573 CLTCL1P53675 1640 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 LOC100289279A0A1B0GTE1 492 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 NDUFB5O43674 189 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 CYP11A1P05108 521 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 MAP4P27816 1152 aaKnown RBP6.48□□□□□ -1.37
CDR2-203ENST00000563573 USP11P51784 963 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 GSTM4Q03013 218 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 IDI1Q13907 227 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 CCNJLQ8IV13 435 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 CLEC4MQ9H2X3 399 aaPredicted RBP6.48□□□□□ -1.37
CDR2-203ENST00000563573 ANO2Q9NQ90 1003 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 ATG3Q9NT62 314 aa6.48□□□□□ -1.37
CDR2-203ENST00000563573 SETD1BQ9UPS6 1966 aaKnown RBP6.48□□□□□ -1.37
CDR2-203ENST00000563573 RIMS1Q86UR5 1692 aaKnown RBP6.47□□□□□ -1.37
CDR2-203ENST00000563573 A0A096LPE4 126 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 A0A1W2PPZ6 126 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 TIAF1O95411 115 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 RXRBP28702 533 aa6.47□□□□□ -1.37
CDR2-203ENST00000563573 CEBPAP49715 358 aaPredicted RBP6.47□□□□□ -1.37
CDR2-203ENST00000563573 HGSNATQ68CP4 663 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms