RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TIAM2Q8IVF5 1701 aa15.08■□□□□ 0.01
USB1-207ENST00000563149 ECM29Q5VYK3 1845 aa15.08■□□□□ 0
USB1-207ENST00000563149 SPDYE4A6NLX3 237 aa15.08■□□□□ 0
USB1-207ENST00000563149 IFNAR1P17181 557 aa15.08■□□□□ 0
USB1-207ENST00000563149 GNAT2P19087 354 aa15.08■□□□□ 0
USB1-207ENST00000563149 RCAN1P53805 252 aa15.08■□□□□ 0
USB1-207ENST00000563149 UBASH3AP57075 661 aa15.08■□□□□ 0
USB1-207ENST00000563149 MAP3K12Q12852 859 aa15.08■□□□□ 0
USB1-207ENST00000563149 KRBA2Q6ZNG9 492 aa15.08■□□□□ 0
USB1-207ENST00000563149 FAM217BQ9NTX9 383 aaPredicted RBP15.08■□□□□ 0
USB1-207ENST00000563149 LMOD1P29536 600 aaPredicted RBP15.07■□□□□ 0
USB1-207ENST00000563149 PHKA1P46020 1223 aa15.07■□□□□ 0
USB1-207ENST00000563149 SAFBQ15424 915 aaKnown RBP eCLIP15.07■□□□□ 0
USB1-207ENST00000563149 MICU3Q86XE3 530 aa15.07■□□□□ 0
USB1-207ENST00000563149 IFNL3Q8IZI9 196 aa15.07■□□□□ 0
USB1-207ENST00000563149 TMTC2Q8N394 836 aa15.07■□□□□ 0
USB1-207ENST00000563149 AIFM3Q96NN9 605 aa15.07■□□□□ 0
USB1-207ENST00000563149 NAPBQ9H115 298 aa15.07■□□□□ 0
USB1-207ENST00000563149 HSD3B7Q9H2F3 369 aa15.07■□□□□ 0
USB1-207ENST00000563149 TMX1Q9H3N1 280 aa15.07■□□□□ 0
USB1-207ENST00000563149 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
USB1-207ENST00000563149 TRMT112Q9UI30 125 aaKnown RBP15.07■□□□□ 0
USB1-207ENST00000563149 SLC12A7Q9Y666 1083 aa15.07■□□□□ 0
USB1-207ENST00000563149 DOCK2Q92608 1830 aa15.07■□□□□ 0
USB1-207ENST00000563149 UBN2Q6ZU65 1347 aa15.07■□□□□ 0
USB1-207ENST00000563149 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
USB1-207ENST00000563149 SLC5A1P13866 664 aa15.06■□□□□ 0
USB1-207ENST00000563149 GPTP24298 496 aa15.06■□□□□ 0
USB1-207ENST00000563149 GABPB1Q06547 395 aaPredicted RBP15.06■□□□□ 0
USB1-207ENST00000563149 SYNE4Q8N205 404 aa15.06■□□□□ 0
USB1-207ENST00000563149 KRI1Q8N9T8 703 aaKnown RBP15.06■□□□□ 0
USB1-207ENST00000563149 CNNM3Q8NE01 707 aa15.06■□□□□ 0
USB1-207ENST00000563149 PHKBQ93100 1093 aa15.06■□□□□ 0
USB1-207ENST00000563149 STRN4Q9NRL3 753 aa15.06■□□□□ 0
USB1-207ENST00000563149 KCNH3Q9ULD8 1083 aa15.06■□□□□ 0
USB1-207ENST00000563149 WWC3Q9ULE0 1092 aa15.06■□□□□ 0
USB1-207ENST00000563149 DENND2AQ9ULE3 1009 aa15.06■□□□□ 0
USB1-207ENST00000563149 PHLPP2Q6ZVD8 1323 aa15.06■□□□□ 0
USB1-207ENST00000563149 IFIT3O14879 490 aaKnown RBP15.06■□□□□ 0
USB1-207ENST00000563149 RANBP6O60518 1105 aaKnown RBP15.06■□□□□ 0
USB1-207ENST00000563149 KIF20AO95235 890 aa15.06■□□□□ 0
USB1-207ENST00000563149 SERPINC1P01008 464 aa15.06■□□□□ 0
USB1-207ENST00000563149 NAA30Q147X3 362 aaPredicted RBP15.06■□□□□ 0
USB1-207ENST00000563149 CCDC93Q567U6 631 aa15.06■□□□□ 0
USB1-207ENST00000563149 AKNAD1Q5T1N1 836 aa15.06■□□□□ 0
USB1-207ENST00000563149 NOSTRINQ8IVI9 506 aa15.06■□□□□ 0
USB1-207ENST00000563149 VSTM4Q8IW00 320 aa15.06■□□□□ 0
USB1-207ENST00000563149 SPATA5Q8NB90 893 aa15.06■□□□□ 0
USB1-207ENST00000563149 FOXP1Q9H334 677 aaPredicted RBP15.06■□□□□ 0
USB1-207ENST00000563149 ZSWIM5Q9P217 1185 aa15.06■□□□□ 0
USB1-207ENST00000563149 DACH1Q9UI36 760 aa15.06■□□□□ 0
USB1-207ENST00000563149 ITGB4P16144 1822 aa15.06■□□□□ 0
USB1-207ENST00000563149 MYO5AQ9Y4I1 1855 aaKnown RBP15.05■□□□□ -0
USB1-207ENST00000563149 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
USB1-207ENST00000563149 MMP1P03956 469 aa15.05■□□□□ -0
USB1-207ENST00000563149 PNOCQ13519 176 aa15.05■□□□□ -0
USB1-207ENST00000563149 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
USB1-207ENST00000563149 RILPL1Q5EBL4 403 aa15.05■□□□□ -0
USB1-207ENST00000563149 METTL16Q86W50 562 aaKnown RBP15.05■□□□□ -0
USB1-207ENST00000563149 TRIM22Q8IYM9 498 aa15.05■□□□□ -0
USB1-207ENST00000563149 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
USB1-207ENST00000563149 STAG1Q8WVM7 1258 aa15.05■□□□□ -0
USB1-207ENST00000563149 SLC26A6Q9BXS9 759 aa15.05■□□□□ -0
USB1-207ENST00000563149 NUP98P52948 1817 aa15.05■□□□□ -0
USB1-207ENST00000563149 CHD4Q14839 1912 aa15.04■□□□□ -0
USB1-207ENST00000563149 RXRAP19793 462 aa15.04■□□□□ -0
USB1-207ENST00000563149 IL6STP40189 918 aaPredicted RBP15.04■□□□□ -0
USB1-207ENST00000563149 ETF1P62495 437 aaKnown RBP15.04■□□□□ -0
USB1-207ENST00000563149 MDM2Q00987 491 aaPredicted RBP15.04■□□□□ -0
USB1-207ENST00000563149 PPP2R5BQ15173 497 aa15.04■□□□□ -0
USB1-207ENST00000563149 LONRF3Q496Y0 759 aa15.04■□□□□ -0
USB1-207ENST00000563149 NT5DC1Q5TFE4 455 aa15.04■□□□□ -0
USB1-207ENST00000563149 KANK3Q6NY19 840 aa15.04■□□□□ -0
USB1-207ENST00000563149 MFSD6Q6ZSS7 791 aa15.04■□□□□ -0
USB1-207ENST00000563149 ZNF34Q8IZ26 560 aa15.04■□□□□ -0
USB1-207ENST00000563149 TRIML1Q8N9V2 468 aa15.04■□□□□ -0
USB1-207ENST00000563149 NKX2-3Q8TAU0 364 aa15.04■□□□□ -0
USB1-207ENST00000563149 SRRTQ9BXP5 876 aaKnown RBP15.04■□□□□ -0
USB1-207ENST00000563149 NACAP1Q9BZK3 213 aa15.04■□□□□ -0
USB1-207ENST00000563149 SENP2Q9HC62 589 aa15.04■□□□□ -0
USB1-207ENST00000563149 EPB41L4AQ9HCS5 686 aaPredicted RBP15.04■□□□□ -0
USB1-207ENST00000563149 FAM53CQ9NYF3 392 aa15.04■□□□□ -0
USB1-207ENST00000563149 CEP131Q9UPN4 1083 aa15.04■□□□□ -0
USB1-207ENST00000563149 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.04■□□□□ -0
USB1-207ENST00000563149 PNPLA7Q6ZV29 1317 aa15.04■□□□□ -0
USB1-207ENST00000563149 ZSCAN12O43309 604 aa15.03■□□□□ -0
USB1-207ENST00000563149 DEXIO95424 95 aa15.03■□□□□ -0
USB1-207ENST00000563149 TOP1P11387 765 aaKnown RBP15.03■□□□□ -0
USB1-207ENST00000563149 PTPREP23469 700 aa15.03■□□□□ -0
USB1-207ENST00000563149 CFAP100Q494V2 611 aa15.03■□□□□ -0
USB1-207ENST00000563149 CT47A1Q5JQC4 288 aaPredicted RBP15.03■□□□□ -0
USB1-207ENST00000563149 SYT10Q6XYQ8 523 aa15.03■□□□□ -0
USB1-207ENST00000563149 MLKLQ8NB16 471 aa15.03■□□□□ -0
USB1-207ENST00000563149 CLIC6Q96NY7 704 aa15.03■□□□□ -0
USB1-207ENST00000563149 RNF41Q9H4P4 317 aaPredicted RBP15.03■□□□□ -0
USB1-207ENST00000563149 PCDHA5Q9Y5H7 936 aa15.03■□□□□ -0
USB1-207ENST00000563149 BCL9O00512 1426 aa15.03■□□□□ -0
USB1-207ENST00000563149 ERICH2A1L162 156 aa15.03■□□□□ -0
USB1-207ENST00000563149 GOLGA6L9A6NEM1 432 aa15.03■□□□□ -0
USB1-207ENST00000563149 GSG1L2A8MUP6 293 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms