RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 FANCD2OSQ96PS1 177 aa5□□□□□ -1.61
CHD9-207ENST00000562806 DBNDD2Q9BQY9 259 aa5□□□□□ -1.61
CHD9-207ENST00000562806 C7orf69Q9H7B7 122 aa5□□□□□ -1.61
CHD9-207ENST00000562806 PICK1Q9NRD5 415 aa5□□□□□ -1.61
CHD9-207ENST00000562806 PCOLCE2Q9UKZ9 415 aa5□□□□□ -1.61
CHD9-207ENST00000562806 PPP1R9AQ9ULJ8 1098 aa5□□□□□ -1.61
CHD9-207ENST00000562806 PCDHA4Q9UN74 947 aa5□□□□□ -1.61
CHD9-207ENST00000562806 LMNB2Q03252 620 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 NFIAQ12857 509 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 TSNAXIP1Q2TAA8 658 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 SGO2Q562F6 1265 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 PRSS36Q5K4E3 855 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 TRIM42Q8IWZ5 723 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 SMYD4Q8IYR2 804 aaPredicted RBP4.99□□□□□ -1.61
CHD9-207ENST00000562806 TMEM87AQ8NBN3 555 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 GRIN3AQ8TCU5 1115 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 TMEM74Q96NL1 305 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 METTL22Q9BUU2 404 aaPredicted RBP4.99□□□□□ -1.61
CHD9-207ENST00000562806 PCDHGC5Q9Y5F6 944 aa4.99□□□□□ -1.61
CHD9-207ENST00000562806 BPNT1O95861 308 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 GRIK1P39086 918 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 CDPF1Q6NVV7 123 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 CDC37L1Q7L3B6 337 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 PHC3Q8NDX5 983 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 ZNF507Q8TCN5 953 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 FBLIM1Q8WUP2 373 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 WDR89Q96FK6 387 aaPredicted RBP4.98□□□□□ -1.61
CHD9-207ENST00000562806 SSU72Q9NP77 194 aaKnown RBP4.98□□□□□ -1.61
CHD9-207ENST00000562806 DISC1Q9NRI5 854 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 ATG3Q9NT62 314 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 FAM105AQ9NUU6 356 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 PODXL2Q9NZ53 605 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 ROBO2Q9HCK4 1378 aa4.98□□□□□ -1.61
CHD9-207ENST00000562806 HMX2A2RU54 273 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 SCAMP3O14828 347 aaKnown RBP4.97□□□□□ -1.61
CHD9-207ENST00000562806 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
CHD9-207ENST00000562806 NFICP08651 508 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 RAB6AP20340 208 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 GBP2P32456 591 aaPredicted RBP4.97□□□□□ -1.61
CHD9-207ENST00000562806 ZNF76P36508 570 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 PDE4BQ07343 736 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 MAP3K11Q16584 847 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 DUSP27Q5VZP5 1158 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 INTS5Q6P9B9 1019 aaKnown RBP4.97□□□□□ -1.61
CHD9-207ENST00000562806 ERMP1Q7Z2K6 904 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 MRRFQ96E11 262 aaKnown RBP4.97□□□□□ -1.61
CHD9-207ENST00000562806 SEMA6CQ9H3T2 930 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 GGT7Q9UJ14 662 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 RNF112Q9ULX5 631 aa4.97□□□□□ -1.61
CHD9-207ENST00000562806 TFE3P19532 575 aaPredicted RBP4.96□□□□□ -1.62
CHD9-207ENST00000562806 RPL6Q02878 288 aaKnown RBP4.96□□□□□ -1.62
CHD9-207ENST00000562806 RING1Q06587 406 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 CAMK2GQ13555 558 aaPredicted RBP4.96□□□□□ -1.62
CHD9-207ENST00000562806 TTLL4Q14679 1199 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 CYP27C1Q4G0S4 372 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 CYFIP1Q7L576 1253 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.96□□□□□ -1.62
CHD9-207ENST00000562806 RNF34Q969K3 372 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 GAL3ST3Q96A11 431 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 BACH2Q9BYV9 841 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 PRKAG2Q9UGJ0 569 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 DAGLAQ9Y4D2 1042 aa4.96□□□□□ -1.62
CHD9-207ENST00000562806 CAP2P40123 477 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 SNAP47Q5SQN1 464 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 ZBTB37Q5TC79 503 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 ZAR1Q86SH2 424 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 GATAD2BQ8WXI9 593 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 RHOVQ96L33 236 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 TBC1D32Q96NH3 1257 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 OSBPL1AQ9BXW6 950 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 WNT10AQ9GZT5 417 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 KCNQ5Q9NR82 932 aa4.95□□□□□ -1.62
CHD9-207ENST00000562806 SUPT16HQ9Y5B9 1047 aaKnown RBP4.95□□□□□ -1.62
CHD9-207ENST00000562806 DCDC2CA8MYV0 355 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 CILPO75339 1184 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 LRIG2O94898 1065 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 PF4P02776 101 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 HCLS1P14317 486 aaPredicted RBP4.94□□□□□ -1.62
CHD9-207ENST00000562806 EIF4A3P38919 411 aaKnown RBP4.94□□□□□ -1.62
CHD9-207ENST00000562806 ETF1P62495 437 aaKnown RBP4.94□□□□□ -1.62
CHD9-207ENST00000562806 MLECQ14165 292 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 MPP2Q14168 576 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 WIPI1Q5MNZ9 446 aaPredicted RBP4.94□□□□□ -1.62
CHD9-207ENST00000562806 RASIP1Q5U651 963 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 LRFN4Q6PJG9 635 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 OGFOD3Q6PK18 319 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 SEZ6L2Q6UXD5 910 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 C12orf40Q86WS4 652 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 HID1Q8IV36 788 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 MFSD2AQ8NA29 543 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 JARID2Q92833 1246 aaPredicted RBP4.94□□□□□ -1.62
CHD9-207ENST00000562806 ISL2Q96A47 359 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 PLPPR2Q96GM1 343 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 KBTBD4Q9NVX7 518 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 ADAM30Q9UKF2 790 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 LEMD3Q9Y2U8 911 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 PCDHB5Q9Y5E4 795 aa4.94□□□□□ -1.62
CHD9-207ENST00000562806 PRAMEF27A3QJZ7 478 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 MINDY4BA8MYZ0 360 aa4.93□□□□□ -1.62
CHD9-207ENST00000562806 GFRA2O00451 464 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms