RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PPP1R12BO60237 982 aaPredicted RBP19.67■□□□□ 0.74
USB1-206ENST00000562534 GNAT2P19087 354 aa19.67■□□□□ 0.74
USB1-206ENST00000562534 ZFPM1Q8IX07 1006 aa19.67■□□□□ 0.74
USB1-206ENST00000562534 LCORLQ8N3X6 602 aa19.67■□□□□ 0.74
USB1-206ENST00000562534 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
USB1-206ENST00000562534 OSBPL5Q9H0X9 879 aaPredicted RBP19.67■□□□□ 0.74
USB1-206ENST00000562534 ATP8A2Q9NTI2 1148 aa19.67■□□□□ 0.74
USB1-206ENST00000562534 RFX7Q2KHR2 1363 aa19.67■□□□□ 0.74
USB1-206ENST00000562534 HSPA6P17066 643 aa19.66■□□□□ 0.74
USB1-206ENST00000562534 MCMDC2Q4G0Z9 681 aa19.66■□□□□ 0.74
USB1-206ENST00000562534 DDRGK1Q96HY6 314 aa19.66■□□□□ 0.74
USB1-206ENST00000562534 GBA2Q9HCG7 927 aaPredicted RBP19.66■□□□□ 0.74
USB1-206ENST00000562534 CREBZFQ9NS37 354 aa19.66■□□□□ 0.74
USB1-206ENST00000562534 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
USB1-206ENST00000562534 ARMC9Q7Z3E5 817 aa19.65■□□□□ 0.74
USB1-206ENST00000562534 MAPKAPK5Q8IW41 473 aa19.65■□□□□ 0.74
USB1-206ENST00000562534 DIAPH3Q9NSV4 1193 aa19.65■□□□□ 0.74
USB1-206ENST00000562534 SLC4A4Q9Y6R1 1079 aa19.65■□□□□ 0.74
USB1-206ENST00000562534 RPAP1Q9BWH6 1393 aaPredicted RBP19.65■□□□□ 0.74
USB1-206ENST00000562534 PATL2C9JE40 543 aaKnown RBP19.64■□□□□ 0.73
USB1-206ENST00000562534 GPAA1O43292 621 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 TTLL12Q14166 644 aaPredicted RBP19.64■□□□□ 0.73
USB1-206ENST00000562534 DCAF15Q66K64 600 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 SKAP1Q86WV1 359 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 FOXP4Q8IVH2 680 aaPredicted RBP19.64■□□□□ 0.73
USB1-206ENST00000562534 CSRNP1Q96S65 589 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 SEC62Q99442 399 aaKnown RBP19.64■□□□□ 0.73
USB1-206ENST00000562534 PI4KBQ9UBF8 816 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 FLT1P17948 1338 aa19.64■□□□□ 0.73
USB1-206ENST00000562534 DDTLA6NHG4 134 aaPredicted RBP19.63■□□□□ 0.73
USB1-206ENST00000562534 UNCXA6NJT0 531 aa19.63■□□□□ 0.73
USB1-206ENST00000562534 M0R2C6 588 aa19.63■□□□□ 0.73
USB1-206ENST00000562534 MFAP1P55081 439 aaKnown RBP19.63■□□□□ 0.73
USB1-206ENST00000562534 GIMAP6Q6P9H5 292 aa19.63■□□□□ 0.73
USB1-206ENST00000562534 SH3BP5LQ7L8J4 393 aa19.63■□□□□ 0.73
USB1-206ENST00000562534 TTC6Q86TZ1 520 aa19.63■□□□□ 0.73
USB1-206ENST00000562534 MKRN1Q9UHC7 482 aaKnown RBP19.63■□□□□ 0.73
USB1-206ENST00000562534 ATRNL1Q5VV63 1379 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 PRKAB2O43741 272 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 TBC1D12O60347 775 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 USP2O75604 605 aaPredicted RBP19.62■□□□□ 0.73
USB1-206ENST00000562534 IREB2P48200 963 aaKnown RBP19.62■□□□□ 0.73
USB1-206ENST00000562534 MAP3K10Q02779 954 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 NMIQ13287 307 aaPredicted RBP19.62■□□□□ 0.73
USB1-206ENST00000562534 MAP3K11Q16584 847 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 SAPCD2Q86UD0 394 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 SDR42E1Q8WUS8 393 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 RUFY2Q8WXA3 655 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 FAM227BQ96M60 508 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 DCP1AQ9NPI6 582 aaPredicted RBP19.62■□□□□ 0.73
USB1-206ENST00000562534 PALD1Q9ULE6 856 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 ABT1Q9ULW3 272 aaKnown RBP19.62■□□□□ 0.73
USB1-206ENST00000562534 TLL2Q9Y6L7 1015 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 MYH7P12883 1935 aa19.62■□□□□ 0.73
USB1-206ENST00000562534 APPP05067 770 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 POLR3DP05423 398 aaPredicted RBP19.61■□□□□ 0.73
USB1-206ENST00000562534 HLA-DOAP06340 250 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 PRKG1Q13976 671 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 CWC27Q6UX04 472 aaKnown RBP19.61■□□□□ 0.73
USB1-206ENST00000562534 CDAN1Q8IWY9 1227 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 AMOTL1Q8IY63 956 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 HHIPL1Q96JK4 782 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 NACAP1Q9BZK3 213 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 MCM9Q9NXL9 1143 aa19.61■□□□□ 0.73
USB1-206ENST00000562534 ANGEL1Q9UNK9 670 aaKnown RBP19.61■□□□□ 0.73
USB1-206ENST00000562534 COL2A1P02458 1487 aaPredicted RBP19.6■□□□□ 0.73
USB1-206ENST00000562534 GSG1L2A8MUP6 293 aa19.6■□□□□ 0.73
USB1-206ENST00000562534 CHMLP26374 656 aa19.6■□□□□ 0.73
USB1-206ENST00000562534 MIGA2Q7L4E1 593 aa19.6■□□□□ 0.73
USB1-206ENST00000562534 ZNF341Q9BYN7 854 aa19.6■□□□□ 0.73
USB1-206ENST00000562534 SAP30BPQ9UHR5 308 aaKnown RBP19.6■□□□□ 0.73
USB1-206ENST00000562534 HERC5Q9UII4 1024 aaKnown RBP19.6■□□□□ 0.73
USB1-206ENST00000562534 TRPM7Q96QT4 1865 aa19.6■□□□□ 0.73
USB1-206ENST00000562534 A0A0D9SFI3 127 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 UBE2Q2LH0YL09 131 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 HUNKP57058 714 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 DEFB115Q30KQ5 88 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 LDLRAD1Q5T700 205 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 METTL16Q86W50 562 aaKnown RBP19.59■□□□□ 0.73
USB1-206ENST00000562534 KLRG1Q96E93 195 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 TAOK2Q9UL54 1235 aa19.59■□□□□ 0.73
USB1-206ENST00000562534 MAP3K9P80192 1104 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 ANKRD13AQ8IZ07 590 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 IFNL3Q8IZI9 196 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 CRACR2BQ8N4Y2 399 aaPredicted RBP19.58■□□□□ 0.72
USB1-206ENST00000562534 TRIM34Q9BYJ4 488 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.58■□□□□ 0.72
USB1-206ENST00000562534 ZNF112Q9UJU3 913 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 GTF3C3Q9Y5Q9 886 aa19.58■□□□□ 0.72
USB1-206ENST00000562534 USP17L12C9JPN9 530 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 USP17L21D6R901 530 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 SBK1Q52WX2 424 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 CCDC129Q6ZRS4 1044 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 MOB2Q70IA6 237 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 EHD4Q9H223 541 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
USB1-206ENST00000562534 CCDC171Q6TFL3 1326 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 RASSF10A6NK89 507 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 PLCD1P51178 756 aa19.56■□□□□ 0.72
USB1-206ENST00000562534 ALX1Q15699 326 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 237 ms