RNA–Protein interactions for RNA: ENST00000562339.5

LINC01225-202, Transcript of LINC01225 pseudogene, humanhuman

TSL 1 (best) BASIC

Gene LINC01225, Length 2,113 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-202ENST00000562339 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 RBM17Q96I25 401 aaKnown RBP17.35■□□□□ 0.37
LINC01225-202ENST00000562339 PKNOX2Q96KN3 472 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 TOMM22Q9NS69 142 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 FAM217BQ9NTX9 383 aaPredicted RBP17.35■□□□□ 0.37
LINC01225-202ENST00000562339 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 ZSCAN30Q86W11 494 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
LINC01225-202ENST00000562339 GJB4Q9NTQ9 266 aa17.35■□□□□ 0.37
LINC01225-202ENST00000562339 GOLGA8AA7E2F4 631 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 MINDY4BA8MYZ0 360 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 ZBTB22O15209 634 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 TMTC2Q8N394 836 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 FLAD1Q8NFF5 587 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 ALG1Q9BT22 464 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 UBR3Q6ZT12 1888 aa17.34■□□□□ 0.37
LINC01225-202ENST00000562339 POLR3DP05423 398 aaPredicted RBP17.33■□□□□ 0.37
LINC01225-202ENST00000562339 IARSP41252 1262 aaKnown RBP17.33■□□□□ 0.37
LINC01225-202ENST00000562339 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.37
LINC01225-202ENST00000562339 CCDC144CPQ8IYA2 1237 aa17.33■□□□□ 0.37
LINC01225-202ENST00000562339 BRIP1Q9BX63 1249 aa17.33■□□□□ 0.37
LINC01225-202ENST00000562339 ERICH2A1L162 156 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 ME1P48163 572 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 DYNLL1P63167 89 aaKnown RBP17.33■□□□□ 0.36
LINC01225-202ENST00000562339 KIF23Q02241 960 aaPredicted RBP17.33■□□□□ 0.36
LINC01225-202ENST00000562339 WTAPQ15007 396 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 CCAR1Q8IX12 1150 aaKnown RBP17.33■□□□□ 0.36
LINC01225-202ENST00000562339 CKAP2LQ8IYA6 745 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 PHKBQ93100 1093 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 CACNA1SQ13698 1873 aa17.33■□□□□ 0.36
LINC01225-202ENST00000562339 MECOMQ03112 1051 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 TYRO3Q06418 890 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 CRY2Q49AN0 593 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 MYSM1Q5VVJ2 828 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 TXNRD3Q86VQ6 643 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 STK11IPQ8N1F8 1099 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 NLGN1Q8N2Q7 840 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 LINC00301Q8NCQ3 95 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 XDHP47989 1333 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 NID2Q14112 1375 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 IGSF3O75054 1194 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 BBOX1O75936 387 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 ESR2Q92731 530 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 ZKSCAN3Q9BRR0 538 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
LINC01225-202ENST00000562339 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
LINC01225-202ENST00000562339 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 RANBP6O60518 1105 aaKnown RBP17.31■□□□□ 0.36
LINC01225-202ENST00000562339 YEATS4O95619 227 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 IFNAR1P17181 557 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 SNW1Q13573 536 aaKnown RBP17.31■□□□□ 0.36
LINC01225-202ENST00000562339 SPTY2D1Q68D10 685 aaPredicted RBP17.31■□□□□ 0.36
LINC01225-202ENST00000562339 KCNG4Q8TDN1 519 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 AIFM3Q96NN9 605 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
LINC01225-202ENST00000562339 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
LINC01225-202ENST00000562339 RCAN1P53805 252 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
LINC01225-202ENST00000562339 KRT40Q6A162 431 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 CCDC73Q6ZRK6 1079 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 FAM200AQ8TCP9 573 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 UBAC1Q9BSL1 405 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 CLIC4Q9Y696 253 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 STK36Q9NRP7 1315 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 CHD4Q14839 1912 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 PCP11498 1178 aaKnown RBP17.3■□□□□ 0.36
LINC01225-202ENST00000562339 PRDX5P30044 214 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
LINC01225-202ENST00000562339 ENGASEQ8NFI3 743 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 GOLPH3LQ9H4A5 285 aa17.3■□□□□ 0.36
LINC01225-202ENST00000562339 CCDC196A0A1B0GTZ2 297 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 CTAGE5O15320 804 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 FMNL1O95466 1100 aaPredicted RBP17.29■□□□□ 0.36
LINC01225-202ENST00000562339 FGRP09769 529 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 ATP2B4P23634 1241 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 MSNP26038 577 aaKnown RBP17.29■□□□□ 0.36
LINC01225-202ENST00000562339 FAM160A1Q05DH4 1040 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 STK38Q15208 465 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 SASS6Q6UVJ0 657 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 SLC26A6Q9BXS9 759 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 A0A1W2PQ27 194 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 A0A1W2PQ64 194 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 A0A1W2PQD8 194 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 ADCY5O95622 1261 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 HOXA10P31260 410 aaPredicted RBP17.29■□□□□ 0.36
LINC01225-202ENST00000562339 TRIM29Q14134 588 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 SF3A1Q15459 793 aaKnown RBP17.29■□□□□ 0.36
LINC01225-202ENST00000562339 RTN1Q16799 776 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 CTR9Q6PD62 1173 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 ZNF804AQ7Z570 1209 aa17.29■□□□□ 0.36
LINC01225-202ENST00000562339 AKT1S1Q96B36 256 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms