RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 NSMCE1Q8WV22 266 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 TXKP42681 527 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
RPAP1-204ENST00000562303 CCDC122Q5T0U0 273 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 CNNM4Q6P4Q7 775 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 NSMFQ6X4W1 530 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 MRRFQ96E11 262 aaKnown RBP12.58□□□□□ -0.4
RPAP1-204ENST00000562303 ZEB2O60315 1214 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 PDE6BP35913 854 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 VPS52Q8N1B4 723 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 NKIRAS1Q9NYS0 192 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 SAMD15Q9P1V8 674 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 SH3TC1Q8TE82 1336 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 IVLP07476 585 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 CNGA4Q8IV77 575 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
RPAP1-204ENST00000562303 PRPF31Q8WWY3 499 aaKnown RBP12.58□□□□□ -0.4
RPAP1-204ENST00000562303 GLT8D2Q9H1C3 349 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 RAD50Q92878 1312 aa12.58□□□□□ -0.4
RPAP1-204ENST00000562303 GIPC1O14908 333 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 HSPA1LP34931 641 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 IRX3P78415 501 aaPredicted RBP12.57□□□□□ -0.4
RPAP1-204ENST00000562303 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
RPAP1-204ENST00000562303 DEXIO95424 95 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 KRT19P08727 400 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 GSDMBQ8TAX9 411 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 ZBTB9Q96C00 473 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
RPAP1-204ENST00000562303 STIM2Q9P246 746 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 CEP85Q6P2H3 762 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 EP400NLQ6ZTU2 488 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 ELP1O95163 1332 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 SLC1A4P43007 532 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 ITIH3Q06033 890 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 USH1GQ495M9 461 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 NIM1KQ8IY84 436 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
RPAP1-204ENST00000562303 TCP10Q12799 353 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 ASIC2Q16515 512 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 ARFGAP2Q8N6H7 521 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 CCDC87Q9NVE4 849 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
RPAP1-204ENST00000562303 PDE8AO60658 829 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 AATFQ9NY61 560 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPAP1-204ENST00000562303 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 EYA2O00167 538 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 CEP128Q6ZU80 1094 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 ZNF365Q70YC5 407 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 FAM184BQ9ULE4 1060 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 AFG3L2Q9Y4W6 797 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
RPAP1-204ENST00000562303 AKR1B15C9JRZ8 316 aaPredicted RBP12.56□□□□□ -0.4
RPAP1-204ENST00000562303 PPP2R5CQ13362 524 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 CUL4BQ13620 913 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 EYA1Q99502 592 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 POLKQ9UBT6 870 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 ADCY7P51828 1080 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 PLBD2Q8NHP8 589 aa12.56□□□□□ -0.4
RPAP1-204ENST00000562303 PCF11O94913 1555 aaKnown RBP12.56□□□□□ -0.4
RPAP1-204ENST00000562303 CETN3O15182 167 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 ATP5DP30049 168 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 TMEM87BQ96K49 555 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 HAUS2Q9NVX0 235 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 PRDM1O75626 825 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 CIB2O75838 187 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 ARID4AP29374 1257 aaPredicted RBP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 TIMM10P62072 90 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 TUBB4BP68371 445 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 HOXC9P31274 260 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 USTQ9Y2C2 406 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 CD19P15391 556 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 CAPN2P17655 700 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 INTS8Q75QN2 995 aaKnown RBP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 HACE1Q8IYU2 909 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 RIOK1Q9BRS2 568 aaKnown RBP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 VPS16Q9H269 839 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 SPC25Q9HBM1 224 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 PRPF6O94906 941 aaKnown RBP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 MYL5Q02045 173 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 DCUN1D2Q6PH85 259 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
RPAP1-204ENST00000562303 VPS18Q9P253 973 aa12.55□□□□□ -0.4
RPAP1-204ENST00000562303 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 MYCT1Q8N699 235 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 CFBP00751 764 aa12.54□□□□□ -0.4
RPAP1-204ENST00000562303 AFAP1L2Q8N4X5 818 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms