RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 NAV1Q8NEY1 1877 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 ECM29Q5VYK3 1845 aa19.43■□□□□ 0.7
PKD1-225ENST00000562297 USP17L12C9JPN9 530 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 USP17L21D6R901 530 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 GSTO1P78417 241 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 DNM1Q05193 864 aaKnown RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 RRP12Q5JTH9 1297 aaKnown RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 STK11IPQ8N1F8 1099 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 FAM184AQ8NB25 1140 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 PDGFDQ9GZP0 370 aaPredicted RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 MROH7-TTC4A0A0A0MT08 1334 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 IFIT3O14879 490 aaKnown RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 DHX16O60231 1041 aaKnown RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 EVX2Q03828 476 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 DEFB132Q7Z7B7 95 aa19.42■□□□□ 0.7
PKD1-225ENST00000562297 RTFDC1Q9BY42 306 aaPredicted RBP19.42■□□□□ 0.7
PKD1-225ENST00000562297 PCP11498 1178 aaKnown RBP19.41■□□□□ 0.7
PKD1-225ENST00000562297 SBK1Q52WX2 424 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 MFSD14BQ5SR56 506 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 COA1Q9GZY4 146 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 NID2Q14112 1375 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 DDX60LQ5H9U9 1706 aaKnown RBP19.41■□□□□ 0.7
PKD1-225ENST00000562297 FSD2A1L4K1 749 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 RIMBP2O15034 1052 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 PPFIA3O75145 1194 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 GADD45BO75293 160 aaPredicted RBP19.41■□□□□ 0.7
PKD1-225ENST00000562297 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
PKD1-225ENST00000562297 TBC1D22AQ8WUA7 517 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 ZNF622Q969S3 477 aaKnown RBP eCLIP19.41■□□□□ 0.7
PKD1-225ENST00000562297 TOMM22Q9NS69 142 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.41■□□□□ 0.7
PKD1-225ENST00000562297 KIF3AQ9Y496 699 aa19.41■□□□□ 0.7
PKD1-225ENST00000562297 FOCADQ5VW36 1801 aa19.4■□□□□ 0.7
PKD1-225ENST00000562297 H0YIN7 160 aa19.4■□□□□ 0.7
PKD1-225ENST00000562297 BAG6P46379 1132 aa19.4■□□□□ 0.7
PKD1-225ENST00000562297 RESTQ13127 1097 aa19.4■□□□□ 0.7
PKD1-225ENST00000562297 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
PKD1-225ENST00000562297 MBD3O95983 291 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 LDHCP07864 332 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 CDC27P30260 824 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.693e-8■■■□□ 18.8
PKD1-225ENST00000562297 FAM173BQ6P4H8 233 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 ESR2Q92731 530 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 ZKSCAN3Q9BRR0 538 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 FAM217BQ9NTX9 383 aaPredicted RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 ARPP21Q9UBL0 812 aaPredicted RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 ZNF646O15015 1829 aaPredicted RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 H3BQV1 296 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 ZBTB43O43298 467 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 RXRAP19793 462 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 ADD1P35611 737 aaKnown RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 SEC23AQ15436 765 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 CAVIN1Q6NZI2 390 aaKnown RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 FAM163AQ96GL9 167 aaPredicted RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 ZC3H12CQ9C0D7 883 aaKnown RBP19.39■□□□□ 0.69
PKD1-225ENST00000562297 SNED1Q8TER0 1413 aa19.39■□□□□ 0.69
PKD1-225ENST00000562297 GAKO14976 1311 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 GPR75-ASB3A0A0A6YYF3 556 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 ORC4O43929 436 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 BAG3O95817 575 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 CYP2D6P10635 497 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 CHRNA5P30532 468 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 GTF2IP78347 998 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 SART3Q15020 963 aaKnown RBP19.38■□□□□ 0.69
PKD1-225ENST00000562297 NTRK3Q16288 839 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 SCN9AQ15858 1988 aa19.38■□□□□ 0.69
PKD1-225ENST00000562297 CPLX1O14810 134 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 FIBPO43427 364 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 WTAPQ15007 396 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 MYL10Q9BUA6 226 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 SLC12A7Q9Y666 1083 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
PKD1-225ENST00000562297 SF3B2Q13435 895 aaKnown RBP19.37■□□□□ 0.69
PKD1-225ENST00000562297 MCM9Q9NXL9 1143 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 MYH1P12882 1939 aa19.37■□□□□ 0.69
PKD1-225ENST00000562297 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 PRDM1O75626 825 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 USP17L8P0C7I0 530 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 BTDP43251 543 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 CERS3Q8IU89 383 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 TMTC2Q8N394 836 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 C7orf43Q8WVR3 580 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
PKD1-225ENST00000562297 TMEM63CQ9P1W3 806 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 RBM27Q9P2N5 1060 aaKnown RBP19.36■□□□□ 0.69
PKD1-225ENST00000562297 ORC3Q9UBD5 711 aaPredicted RBP19.36■□□□□ 0.69
PKD1-225ENST00000562297 TNKSO95271 1327 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 C10orf71Q711Q0 1435 aa19.36■□□□□ 0.69
PKD1-225ENST00000562297 RCAN1P53805 252 aa19.35■□□□□ 0.69
PKD1-225ENST00000562297 KRT85P78386 507 aa19.35■□□□□ 0.69
PKD1-225ENST00000562297 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
PKD1-225ENST00000562297 ENAHQ8N8S7 591 aaPredicted RBP19.35■□□□□ 0.69
PKD1-225ENST00000562297 UBAC1Q9BSL1 405 aa19.35■□□□□ 0.69
PKD1-225ENST00000562297 TMX4Q9H1E5 349 aaPredicted RBP19.35■□□□□ 0.69
PKD1-225ENST00000562297 SUGT1Q9Y2Z0 365 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms