RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 USP40Q9NVE5 1235 aa25.21■■□□□ 1.63
PDXDC1-207ENST00000562119 TNPO2O14787 897 aaKnown RBP25.2■■□□□ 1.62
PDXDC1-207ENST00000562119 GADL1Q6ZQY3 521 aa25.2■■□□□ 1.62
PDXDC1-207ENST00000562119 SCYL3Q8IZE3 742 aa25.2■■□□□ 1.62
PDXDC1-207ENST00000562119 DIS3LQ8TF46 1054 aaKnown RBP25.2■■□□□ 1.62
PDXDC1-207ENST00000562119 AFG3L2Q9Y4W6 797 aa25.2■■□□□ 1.62
PDXDC1-207ENST00000562119 GDF15Q99988 308 aa25.19■■□□□ 1.62
PDXDC1-207ENST00000562119 SLC45A1Q9Y2W3 748 aa25.19■■□□□ 1.62
PDXDC1-207ENST00000562119 SLURP2P0DP57 97 aa25.18■■□□□ 1.62
PDXDC1-207ENST00000562119 CAPN2P17655 700 aa25.18■■□□□ 1.62
PDXDC1-207ENST00000562119 LPIN2Q92539 896 aa25.18■■□□□ 1.62
PDXDC1-207ENST00000562119 PICK1Q9NRD5 415 aa25.18■■□□□ 1.62
PDXDC1-207ENST00000562119 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
PDXDC1-207ENST00000562119 AK9Q5TCS8 1911 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 ALPK3Q96L96 1907 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 UNC80Q8N2C7 3258 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 SLC5A1P13866 664 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 BMP8BP34820 402 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 MNX1P50219 401 aaPredicted RBP25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 SH3BP5LQ7L8J4 393 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 SMCR8Q8TEV9 937 aaPredicted RBP25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 TAOK2Q9UL54 1235 aa25.16■■□□□ 1.62
PDXDC1-207ENST00000562119 LDHBP07195 334 aaKnown RBP25.15■■□□□ 1.62
PDXDC1-207ENST00000562119 RFX5P48382 616 aaPredicted RBP25.15■■□□□ 1.62
PDXDC1-207ENST00000562119 RGS3P49796 1198 aa25.15■■□□□ 1.62
PDXDC1-207ENST00000562119 NECAB2Q7Z6G3 386 aa25.15■■□□□ 1.62
PDXDC1-207ENST00000562119 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.15■■□□□ 1.62
PDXDC1-207ENST00000562119 TRIM75PA6NK02 468 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 EYA2O00167 538 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 MAP3K10Q02779 954 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 C7orf61Q8IZ16 206 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 ANKRD13CQ8N6S4 541 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 IDI2Q9BXS1 227 aa25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.14■■□□□ 1.624e-6■□□□□ 9.4
PDXDC1-207ENST00000562119 ZMYND8Q9ULU4 1186 aaPredicted RBP25.14■■□□□ 1.62
PDXDC1-207ENST00000562119 GPR153Q6NV75 609 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 Q7L0L9 218 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 ATG9AQ7Z3C6 839 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 CCDC84Q86UT8 332 aaPredicted RBP25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 DEFB123Q8N688 67 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 COA7Q96BR5 231 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 USP44Q9H0E7 712 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 RFX7Q2KHR2 1363 aa25.13■■□□□ 1.61
PDXDC1-207ENST00000562119 DDTLA6NHG4 134 aaPredicted RBP25.12■■□□□ 1.61
PDXDC1-207ENST00000562119 ENTPD3O75355 529 aa25.12■■□□□ 1.61
PDXDC1-207ENST00000562119 AGTPBP1Q9UPW5 1226 aa25.12■■□□□ 1.61
PDXDC1-207ENST00000562119 MYH13Q9UKX3 1938 aa25.12■■□□□ 1.61
PDXDC1-207ENST00000562119 SALL1Q9NSC2 1324 aa25.12■■□□□ 1.61
PDXDC1-207ENST00000562119 TREML2Q5T2D2 321 aa25.11■■□□□ 1.61
PDXDC1-207ENST00000562119 LRRFIP2Q9Y608 721 aaKnown RBP25.11■■□□□ 1.61
PDXDC1-207ENST00000562119 DOCK2Q92608 1830 aa25.11■■□□□ 1.61
PDXDC1-207ENST00000562119 PTPRFP10586 1907 aa25.1■■□□□ 1.61
PDXDC1-207ENST00000562119 CTNND1O60716 968 aaKnown RBP25.1■■□□□ 1.61
PDXDC1-207ENST00000562119 FAM110CQ1W6H9 321 aa25.1■■□□□ 1.61
PDXDC1-207ENST00000562119 ZSCAN29Q8IWY8 852 aaPredicted RBP25.1■■□□□ 1.61
PDXDC1-207ENST00000562119 DDX4Q9NQI0 724 aaKnown RBP25.1■■□□□ 1.61
PDXDC1-207ENST00000562119 ANKLE1Q8NAG6 615 aa25.09■■□□□ 1.61
PDXDC1-207ENST00000562119 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
PDXDC1-207ENST00000562119 PHIPQ8WWQ0 1821 aa25.09■■□□□ 1.61
PDXDC1-207ENST00000562119 GAKO14976 1311 aa25.09■■□□□ 1.61
PDXDC1-207ENST00000562119 HMGCRP04035 888 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 SYN1P17600 705 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 PHKA1P46020 1223 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 TRIM32Q13049 653 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 MRPL50Q8N5N7 158 aaKnown RBP25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 GNL3LQ9NVN8 582 aaKnown RBP25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 STXBP5LQ9Y2K9 1186 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 DOCK3Q8IZD9 2030 aa25.08■■□□□ 1.61
PDXDC1-207ENST00000562119 MAGEA10P43363 369 aaPredicted RBP25.07■■□□□ 1.6
PDXDC1-207ENST00000562119 ATP2B3Q16720 1220 aa25.07■■□□□ 1.6
PDXDC1-207ENST00000562119 LRIT3Q3SXY7 679 aa25.07■■□□□ 1.6
PDXDC1-207ENST00000562119 GJD2Q9UKL4 321 aa25.07■■□□□ 1.6
PDXDC1-207ENST00000562119 DENND2AQ9ULE3 1009 aa25.07■■□□□ 1.6
PDXDC1-207ENST00000562119 DOCK1Q14185 1865 aa25.06■■□□□ 1.6
PDXDC1-207ENST00000562119 NBPF3Q9H094 633 aa25.06■■□□□ 1.6
PDXDC1-207ENST00000562119 SIL1Q9H173 461 aa25.06■■□□□ 1.6
PDXDC1-207ENST00000562119 MTMR10Q9NXD2 777 aa25.06■■□□□ 1.6
PDXDC1-207ENST00000562119 RPTORQ8N122 1335 aa25.06■■□□□ 1.6
PDXDC1-207ENST00000562119 PICALMQ13492 652 aa25.05■■□□□ 1.6
PDXDC1-207ENST00000562119 TDHQ8IZJ6 230 aa25.05■■□□□ 1.6
PDXDC1-207ENST00000562119 PNMA3Q9UL41 463 aa25.05■■□□□ 1.6
PDXDC1-207ENST00000562119 SEMA3EO15041 775 aa25.04■■□□□ 1.6
PDXDC1-207ENST00000562119 PROCA1Q8NCQ7 364 aaPredicted RBP25.04■■□□□ 1.6
PDXDC1-207ENST00000562119 C11orf49Q9H6J7 331 aa25.04■■□□□ 1.6
PDXDC1-207ENST00000562119 HMX1Q9NP08 348 aaPredicted RBP25.04■■□□□ 1.6
PDXDC1-207ENST00000562119 PTPRCP08575 1304 aa25.04■■□□□ 1.6
PDXDC1-207ENST00000562119 LAMA2P24043 3122 aaKnown RBP25.03■■□□□ 1.6
PDXDC1-207ENST00000562119 FAM196BA6NMK8 535 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 ADORA1P30542 326 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 GCLCP48506 637 aaPredicted RBP25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 SPP2Q13103 211 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 FAM163AQ96GL9 167 aaPredicted RBP25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 CEP126Q9P2H0 1117 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 OGDHLQ9ULD0 1010 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 MYH2Q9UKX2 1941 aa25.02■■□□□ 1.6
PDXDC1-207ENST00000562119 DDX60LQ5H9U9 1706 aaKnown RBP25.01■■□□□ 1.59
PDXDC1-207ENST00000562119 TBC1D12O60347 775 aa25.01■■□□□ 1.59
PDXDC1-207ENST00000562119 CIAO1O76071 339 aa25.01■■□□□ 1.59
PDXDC1-207ENST00000562119 BTDP43251 543 aa25.01■■□□□ 1.59
PDXDC1-207ENST00000562119 DZIP1Q86YF9 867 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms