RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 ZSWIM6Q9HCJ5 1215 aa12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 USP40Q9NVE5 1235 aa12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 ANAPC4Q9UJX5 808 aa12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 PCDHAC2Q9Y5I4 1007 aa12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 MYH1P12882 1939 aa12.89□□□□□ -0.35
AC009054.2-201ENST00000561956 FLT1P17948 1338 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 WDHD1O75717 1129 aaPredicted RBP12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 GMPSP49915 693 aaPredicted RBP12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 NEK4P51957 841 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 ZNF280AP59817 542 aaPredicted RBP12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 PPARAQ07869 468 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 GPR162Q16538 588 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 MAPKAPK5Q8IW41 473 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 MTMR14Q8NCE2 650 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 DPF2Q92785 391 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 SNX21Q969T3 373 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 RNF181Q9P0P0 153 aa12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 ARPP21Q9UBL0 812 aaPredicted RBP12.88□□□□□ -0.35
AC009054.2-201ENST00000561956 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 SPDYE2BA6NHP3 402 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 USP17L12C9JPN9 530 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 USP17L21D6R901 530 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 ST18O60284 1047 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 GRIN3BO60391 1043 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 CD2BP2O95400 341 aaKnown RBP12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 SPDYE6P0CI01 402 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 CPA1P15085 419 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 STAG1Q8WVM7 1258 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 BBXQ8WY36 941 aaPredicted RBP12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 ZBED3Q96IU2 234 aaPredicted RBP12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 TTC14Q96N46 770 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 NEK1Q96PY6 1258 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 MCM9Q9NXL9 1143 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
AC009054.2-201ENST00000561956 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 CYP2D6P10635 497 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 RPS6KB1P23443 525 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 BECN1Q14457 450 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 DLGAP5Q15398 846 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 C12orf60Q5U649 245 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 GPC2Q8N158 579 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 PRMT6Q96LA8 375 aaPredicted RBP12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 IPO9Q96P70 1041 aaKnown RBP12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 TBC1D2Q9BYX2 928 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 TACC3Q9Y6A5 838 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 NEDD4P46934 1319 aa12.86□□□□□ -0.35
AC009054.2-201ENST00000561956 SHTN1A0MZ66 631 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 NFIAQ12857 509 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 HSCBQ8IWL3 235 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 MICALL2Q8IY33 904 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 MB21D2Q8IYB1 491 aaPredicted RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 NCOA7Q8NI08 942 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 OSBPL5Q9H0X9 879 aaPredicted RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 ALDH8A1Q9H2A2 487 aaPredicted RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 SAP30BPQ9UHR5 308 aaKnown RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 COL2A1P02458 1487 aaPredicted RBP12.85□□□□□ -0.35
AC009054.2-201ENST00000561956 FGRP09769 529 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 PCP11498 1178 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 EXOSC10Q01780 885 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 EVX2Q03828 476 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 TRDNQ13061 729 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 PICALMQ13492 652 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 MFSD6Q6ZSS7 791 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 PAXIP1Q6ZW49 1069 aaPredicted RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 DHX32Q7L7V1 743 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 RALYLQ86SE5 291 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 CNNM2Q9H8M5 875 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 FAM198AQ9UFP1 575 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 CNOT7Q9UIV1 285 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 WDR19Q8NEZ3 1342 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 UTRNP46939 3433 aa12.84□□□□□ -0.35
AC009054.2-201ENST00000561956 SIPA1L1O43166 1804 aa12.83□□□□□ -0.35
AC009054.2-201ENST00000561956 ORC4O43929 436 aa12.83□□□□□ -0.36
AC009054.2-201ENST00000561956 ENTPD3O75355 529 aa12.83□□□□□ -0.36
AC009054.2-201ENST00000561956 POLR3DP05423 398 aaPredicted RBP12.83□□□□□ -0.36
AC009054.2-201ENST00000561956 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms